Shewanella woodyi: Swoo_3794
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Entry
Swoo_3794 CDS
T00676
Name
(GenBank) Phosphoesterase HXTX
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
swd03016
]
Swoo_3794
Enzymes [BR:
swd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Swoo_3794
Transfer RNA biogenesis [BR:
swd03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Swoo_3794
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ACA88053
UniProt:
B1KEN8
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All DBs
Position
4633340..4633939
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AA seq
199 aa
AA seq
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MKRLFLGIAPTQTQNRQLSALQAGLSLDGKSISPKNFHMTLAFLGQLDIHQQFKLQHKLD
ILHASKALSWPRFTVTLDTLTLWRKPQILCLSGKILDPNLQYILDECHSLLQQVGIKLPH
HQHIKATQNSLPQEVNFVPHISLFRKAKQLPIMREAIALTLCPKKIHLYVSVSKPTGVEY
QILQSWPFAEITGKKNAAD
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgattatttctcggtattgcaccgactcaaactcaaaacagacagctgtcggcc
ctacaggctgggctatcacttgatggtaaaagcatctcgccgaaaaactttcatatgact
ttggcctttcttggacaacttgatatacaccaacagttcaaattgcagcataaactcgac
attctccatgcttcaaaagcgttaagctggccaagatttacggtcaccttagacacatta
accctttggcgaaaacctcagatactctgtctatctggaaaaatactcgatcccaatctg
caatatatcttagatgagtgccactcacttctgcagcaggtaggtattaagctccctcat
catcagcatataaaagctacacaaaactccctgccacaagaagttaattttgttccccat
atcagcctatttaggaaagcaaagcagttaccaattatgcgtgaagctatcgcccttact
ctttgcccaaagaagatccatctctatgtttccgtcagtaagcccacaggtgtcgaatat
cagatcttacaatcttggccattcgcagagataacaggcaaaaaaaatgctgccgattag
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