Shewanella woodyi: Swoo_3889
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Entry
Swoo_3889 CDS
T00676
Name
(GenBank) D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
swd
Shewanella woodyi
Pathway
swd00260
Glycine, serine and threonine metabolism
swd00270
Cysteine and methionine metabolism
swd00680
Methane metabolism
swd01100
Metabolic pathways
swd01110
Biosynthesis of secondary metabolites
swd01120
Microbial metabolism in diverse environments
swd01200
Carbon metabolism
swd01230
Biosynthesis of amino acids
Module
swd_M00020
Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
Swoo_3889
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Swoo_3889
00270 Cysteine and methionine metabolism
Swoo_3889
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
swd04147
]
Swoo_3889
Enzymes [BR:
swd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
Swoo_3889
1.1.1.399 2-oxoglutarate reductase
Swoo_3889
Exosome [BR:
swd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Swoo_3889
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
ACT_AHAS_ss
ACT
NAD_binding_2
AdoHcyase_NAD
3HCDH_N
KARI_N
UDPG_MGDP_dh_N
XdhC_C
ACT_9
RS_preATP-grasp-like
ACT_4
Motif
Other DBs
NCBI-ProteinID:
ACA88147
UniProt:
B1KFH2
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All DBs
Position
4740890..4742119
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AA seq
409 aa
AA seq
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MAKHSLDKDKIKILLLEGVHQSAVDVFKRAGYSNIEYHKASLGEEALKASIKDAHFVGLR
SRTQLTEAVLSQAEKLVGIGCFCIGTNQVDLNYAEKLGVPVFNAPFSNTRSVAELVLGEI
IMLFRGIPQRNAMAHRGGWLKSATGSYEARGKTLGVIGYGHIGTQLGILAETLGMRVVFF
DIEDKLPLGNAQQIHSMQELMSLADVVSLHVPETPQTKEMIGEAELACMKKGSILINASR
GTVVDIDALASTLKAEKIAGAAIDVFPVEPKSNDDEFISPLRGLDNVILTPHVGGSTQEA
QENIGIEVAGKLAKYSDNGSTMTAVNFPEVSLAQHKDASRLLHIHHNRPGVLIKINQAFA
EKGINIAAQYLQTTAEIGYVVMEVDSDQADEALEQMKAIEGTIRTRLLH
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacattcgctggacaaggataagatcaagatcctgcttttggaaggcgtccac
caatcagcggtagatgtattcaagcgtgctggttacagcaacatcgaataccacaaggca
tctcttggagaagaggcactcaaggcatcgataaaggatgcgcattttgttggcctaaga
tcacggactcaattgactgaagcggtattaagtcaggcggagaaactggtcggaattggt
tgtttctgtatcggtactaatcaggtcgatctcaactatgctgagaaactcggtgtgcct
gtattcaacgcgcccttctctaacacacgcagtgtggcagagctggtacttggcgagatc
atcatgctatttcgtggtattcctcagcgtaatgccatggctcatcgtggtggttggctt
aagagtgcaaccggtagctatgaagcccgtggcaaaacactcggtgtgataggttatggc
catattggtactcagttagggatcctagccgagaccttaggtatgcgtgtcgttttcttc
gatatcgaagataagctaccactgggcaatgcccagcagatccactcgatgcaggagctg
atgtctcttgccgatgtggtcagtctgcatgttcctgagaccccacaaaccaaagagatg
atcggtgaagcagagctggcttgtatgaaaaaaggcagcatcttaattaacgcctctcgc
ggtactgtggtcgacattgacgctctagcatcaacgcttaaagctgaaaagatagctggt
gcagccatcgacgttttccctgtagagcctaagtctaacgatgatgagtttattagcccg
ctacgtggtctagacaacgtaatcttaaccccacatgtgggcggcagcactcaggaagca
caggagaacataggtatcgaggttgctggcaagttggccaagtactctgataatggatca
accatgaccgcagtgaacttccctgaggtatcgttggcccagcataaagatgcttcacgt
ctgctgcatattcaccacaaccgccctggcgtgttgatcaagattaaccaagcgtttgcc
gagaaagggatcaatatcgcggcccagtatctgcaaacaacggctgaaattggttacgtt
gtgatggaagtggattcagaccaagccgatgaagcactcgagcagatgaaggccattgaa
ggcactattcgtactcgtctacttcactaa
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