Shewanella woodyi: Swoo_3926
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Entry
Swoo_3926 CDS
T00676
Name
(GenBank) formate dehydrogenase, alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
swd
Shewanella woodyi
Pathway
swd00630
Glyoxylate and dicarboxylate metabolism
swd00680
Methane metabolism
swd01100
Metabolic pathways
swd01120
Microbial metabolism in diverse environments
swd01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Swoo_3926
09102 Energy metabolism
00680 Methane metabolism
Swoo_3926
Enzymes [BR:
swd01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
Swoo_3926
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
Fer4_7
Fer4_21
Fer4_8
Fer4
Fer4_9
Fer4_6
Fer4_10
Fer4_17
Fer2
Fer4_2
Fer4_16
Fer4_4
Fer4_18
DUF4350
Motif
Other DBs
NCBI-ProteinID:
ACA88184
UniProt:
B1KFK9
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All DBs
Position
4784704..4787478
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AA seq
924 aa
AA seq
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MDIKLHTIAFTLDDVEVTASPDETLWQVAKRQGNKLPHLCFTDSSGYRPDGNCRACMVEI
EGERVLAASCLRKPTQGMVVHSQSSRATRSRKMVMELLLTDQPKQISDSGSHLSQMAQLQ
DIDASRFPKIEPKRVPLTDDSHVAMSVNLDACIQCNLCVRACREVQVNDVIGMANRGRDS
AIIFDQSDEMAESSCVACGECVQVCPTDALMPASIANNTNMTCEQSIDKAVSSVCPFCGV
GCQISLKVKDNKVQYVDGLDGPANESRLCVKGRFGYDYIHHAHRLTKPLIRLKDAPKGLN
VDPANPLTHFREASWQEAIEVAAKGLSTLKKNHGGESVAGFGSAKCTNEEAYLFQKLIRQ
GFGHNNVDHCTRLCHASSVAALIENIGSGAVTASFNEIEHADVAIVIGCNPTENHPVAAT
YFKQFVRRGGKLIVMDPRGTAMKRFATHMLQFRPGTDVALLNAIMHIIVDEGLQNQAYID
EHTENWQAQKDHLVGFSPEKMAPLCGIDAQTLRQVARTFAKGKAGMIFWGMGVSQHIHGT
DNSRCLISLALMCGHVGRSGSGLHPLRGQNNVQGASDAGLIPMFLPDYQTVKDNNIRAHF
DEIWQEESDAIAVSATPGLTVVEIIDAIHKDMIRGMYILGENPAMSDPDVSHARNALAKL
EHLIVQDIFLTETASFADVIFPAAAFAEKDGTVTNTNRQVQMGRKALDAPGEAKQDWAIL
IELANALGLNWQYPSPREIFNEMKLGMSSLDNISWERLSSENAVTYPCNGENQPGEAIVF
GDGFPRQSGRAKFTPASVIAPDELPDKEYPLIMTTGRQLEHWHTGSMTRRSKVLDAVEPE
ANCSLHPKTLRRLGISPGGMIRLLSRRGEIELLARADRAVAEDMVFVPFAYVEAAANLLT
NPALDPVGKIPEFKFAAVRGEAVN
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggatattaaactgcacaccatcgcctttaccttagatgatgttgaggtcacagcaagc
cccgatgaaacactatggcaagtcgccaaacgccagggaaataagctacctcacctctgc
tttactgacagttcaggttatcgacccgacggtaactgccgagcctgcatggttgagata
gagggagagcgggttcttgccgcctcctgtctgcgcaaacctactcaaggcatggtggtg
catagtcaaagttctcgagcaacacgctctcgaaaaatggtgatggagttattgttaacc
gatcaaccaaagcagatcagtgacagtggctcccatctttcccaaatggcacagttacaa
gatattgatgccagtcgatttccaaaaatagagccaaagcgagtccccctaaccgacgac
agtcatgtcgccatgagtgttaatcttgatgcgtgcatccagtgtaatttgtgcgtacga
gcatgtcgggaggtgcaggttaacgatgttatcggcatggccaatcgaggccgagatagc
gccatcatcttcgatcaaagtgatgagatggcagagtctagctgcgtcgcctgtggtgag
tgtgtgcaggtatgtccaaccgatgccctaatgccagcatctattgctaacaataccaac
atgacctgtgagcaatcaatcgataaagcggtctcatctgtatgtccattttgtggtgtt
gggtgtcagatatctttgaaggtaaaagataataaggttcagtatgtcgacggattagat
ggtccagcgaatgaatctcgtctctgtgttaaaggacgctttggttacgattatatccac
catgctcaccgactaactaagccgcttatcagactcaaagatgcccccaaggggttaaat
gttgaccctgctaatcctcttactcactttagagaagccagttggcaagaggcgatagag
gtcgccgccaaggggctgtcaacacttaaaaaaaatcatggcggtgagagtgtggcggga
tttggctcagccaagtgcaccaatgaagaagcttacctattccagaaattaattcgccaa
ggttttggccataacaatgtcgatcactgcactcgtttgtgtcatgcctcttctgtagcg
gccctgattgaaaatattggctcaggggccgtgaccgcctcattcaacgagatagagcac
gctgatgttgctatcgtaatagggtgtaaccccacagaaaatcacccagtcgcagccact
tattttaaacagtttgtgcgccgaggcggcaagttaatcgtgatggatcctcgcggcaca
gccatgaagcgtttcgccacgcatatgctgcagtttagacccggcaccgatgtagctcta
cttaacgccatcatgcatatcattgtggatgaggggctgcaaaaccaagcctatatcgat
gagcacacggaaaactggcaagctcagaaagatcaccttgttggcttctcgcccgaaaag
atggcacctttgtgcggcatagatgcacagacacttcgtcaggtagcacgcaccttcgct
aaaggcaaagcgggcatgatcttctggggcatgggggtcagtcaacatattcacggtacc
gataactctcgctgcctcatctcactcgccctcatgtgtggccatgtgggtcgtagcggc
agtggcttgcatcctctcagggggcaaaacaatgtccaaggcgcatcagatgctggcctt
attcccatgtttctccctgactatcaaactgtgaaagataacaatatccgcgcacacttt
gatgagatctggcaagaggagagtgacgcgatagcggtatcagcaaccccaggtctcaca
gtggtggagattatcgatgccatccataaggatatgatccgcggcatgtacattctcggt
gaaaaccctgcgatgtcagaccccgatgttagccatgcgcgtaatgcattagctaaactg
gagcacttaatcgttcaggatatcttcttaaccgaaaccgccagtttcgcagatgttatc
ttccctgccgctgcctttgccgaaaaagatggcactgtgaccaataccaatcgtcaggtg
cagatggggagaaaagcgctggatgcgccgggagaagccaagcaagattgggcgatactg
attgagcttgccaacgccctagggcttaactggcaatatccttcaccccgcgagatcttc
aatgagatgaagctgggcatgagttcattagacaatattagttgggaaaggctatcgagt
gaaaacgcagtcacttacccctgtaatggtgaaaaccaacccggtgaagccattgtattt
ggtgatggttttccccgccagagtggccgagcaaagtttaccccggccagtgttattgcc
cccgacgaactgccggataaggagtaccctttgattatgaccacaggtcgtcaattggag
cattggcatacgggcagtatgacacgtcgctccaaagtcttagatgcagtagagcctgag
gccaactgctcacttcatcccaagacattaaggcgcttaggaatctcgccaggtggaatg
atccgcttactctctcgccgcggtgagatagagctgctcgcccgcgcagatagagctgtt
gccgaagatatggtatttgtccccttcgcttatgtggaagcggcggcaaatttactgacc
aacccagcactggatcccgtaggaaaaattccagagtttaagtttgcagccgtacgtgga
gaagcggttaattag
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