Shewanella woodyi: Swoo_4074
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Entry
Swoo_4074 CDS
T00676
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K02005
HlyD family secretion protein
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
Swoo_4074
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Ortholog
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GFIT
Motif
Pfam:
BSH_CzcB
Beta-barrel_RND_2
BSH_RND_rel
Biotin_lipoyl
YknX_C
TetR_C_2
BSH_RND
Y4lR_N
BSH_YknX
CzcB_C
Baseplate_J
PYNP_C
HH_EMRA
HH_MFP_RND
Motif
Other DBs
NCBI-ProteinID:
ACA88330
UniProt:
B1KH18
LinkDB
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Position
complement(4945171..4946433)
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AA seq
420 aa
AA seq
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MIQDTSGQDTVVQASKASRLKWPLIATAAALLVSGLVWSSVGGSNVSESISRSDLRFATL
EQGTLTRDIATTGKIVAANAPILYSTDQGTVTLLAKPGDKVELGDVVATIESHQLTNSLK
QQEALLEGMQSSLERARLDARREQLKAQQTLDMAKVDLEAADRESRRGDELIENKLISKI
DFEKGKDDLHKAKLLSAHAQQEAELTRDTLAFEIKNKASEVNRQKLVVSELERQVAALNI
KAPVGGIIGNWLTEQKARIGQSQPILTVVDLSAFEAELAVPESYADELGLGMDVELKFGE
LTLMGELSSISPEVRNREVTARVRFEQDDRLHLRQNQRLSARVLLENRPNVLMVKRGAFV
STGGGREVYTMNGDIAEQTEIQLGARSMSHIEVLQGGKAGDIWVISSVQPFNQAQQVLVR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgattcaggatactagcggacaggacactgtggtacaggcaagcaaagctagcaggctt
aagtggcctttaattgcaactgccgcagcacttttggtttcaggtctggtttggtcaagt
gttggtggcagtaatgtcagtgagtcgattagtcgtagtgacttaagatttgcgacctta
gagcaggggactttaacgcgggatattgccaccacaggtaaaattgtcgcggccaatgcg
ccaatcctctacagcactgatcaaggtacggtgacgttactggcaaaacccggtgataaa
gttgagttaggggatgtggtggcaactatcgaaagccatcagttaacgaacagtcttaag
cagcaggaagccttgcttgaggggatgcagagctcattggagcgtgcccgtcttgacgct
cgtcgagagcagttaaaagcgcagcagactctcgatatggctaaggtcgaccttgaggcc
gcagacagagagagtcgtcgtggtgatgagttaattgagaataaacttatctcaaagatc
gatttcgagaagggtaaagatgatctgcataaggccaagttactatctgcccatgcacag
caagaagctgagttgactcgcgataccttagcgtttgagattaaaaataaggcttcagag
gttaaccgtcagaagttagtggtgagtgagcttgagcgtcaagttgcagcactgaatatt
aaagcaccggttggcggcattatcggtaactggttaacagagcagaaagcgcgtattggt
cagagtcaacctatcttaactgtggtggatttaagtgcttttgaagctgagttagcggta
ccagaatcttacgctgatgaacttggtttaggcatggatgttgagttgaaatttggtgaa
ctgaccttgatgggggagctctcctctatctctcctgaggtaagaaatcgtgaggttact
gcccgtgtccgttttgagcaagatgaccgtttgcaccttcgtcaaaatcaaagattatca
gcacgagtattactcgaaaatagacctaacgttttgatggtgaagcgtggggcatttgta
tcaaccggtggtggtcgagaggtgtacaccatgaatggcgatatcgctgagcagacagag
atccaactgggggcccgcagcatgagccatatcgaggtactacagggtggtaaggctggc
gatatatgggtcatttcaagcgttcagcccttcaatcaagctcagcaagttttggttcgc
taa
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