Shewanella woodyi: Swoo_4104
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Entry
Swoo_4104 CDS
T00676
Name
(GenBank) choline/carnitine/betaine transporter
KO
K03451
betaine/carnitine transporter, BCCT family
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
Swoo_4104
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Paralog
Gene cluster
GFIT
Motif
Pfam:
BCCT
Motif
Other DBs
NCBI-ProteinID:
ACA88360
UniProt:
B1KH48
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Position
4985030..4986982
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AA seq
650 aa
AA seq
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MKKHFELIDKPTFFGALILLFSVVIPLLIFPAEGAHWIAVAKTFMTDKLGFAYLGLGLAA
FFFMIYIIFSDIGQIKLGDPDEAPEFALASWAAMLFCGGIGASILYWGTIEWAYYYQNPP
FQLEAGSEEAVRWAATYGLFHWGPIAWCIYMIPAIPIAYFFYVRKQPVLKVSAALMPVIG
EANSFGKLGKVIDILFIFGLLGGAATTLGLAAPLINEGISYLFGIPTSTGSQIGVLLLCT
AIFAYSSYKGMDEGIKVLSNINFWGALGLLAFVLVCGPTIFMLETGLDSIGRMLSNFFVM
ATWAEPFGGLGTFADTHFPQDWTIFYWAWWLVFAPSMGLFVARISRGRTIKQMVSGAVFF
GSLGCAMYFMILGNYGLSLQLSGQLDVVGILNSEGATRAIFSILEQLPFSTLIIALFTLL
CIIFTATTFDSISYILASVVQTNVTEDPMRWNRLFWAFTLSFMPSVLMFMGGLATLQTAA
IVGGLPLLVIAIMLMISGVKAAMLDLSHQDDYVDPVINISDLPEVDPWSKEGQALARFEL
LRDNAIEAANLEREAIDAIWLLKKQLRREALSRGESSLELGNAPDEIITELRQLTEDAMK
AKERKLEASEQAQAARSSFNELMRDKEEGELSLAQEEAKAAIQARLNTPG
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacactttgaacttatcgataagccaaccttttttggggctttaatactgctt
ttttcggttgtgatccccttgcttatatttccagcagagggtgcacattggattgctgta
gctaaaacttttatgacagataagctaggttttgcttatcttggcctagggttagcggca
ttcttctttatgatatatatcatcttctccgatataggccagataaaacttggggatcct
gatgaagcccctgaattcgctctcgcctcttgggcagcgatgctattttgtggtggtatc
ggtgcaagtatcctctattggggaacgattgaatgggcctactactaccaaaatccccct
ttccagttggaagctggtagcgaggaagctgtccgctgggcagcaacctacggcctattc
cattggggaccgattgcttggtgtatctatatgatcccagcaatcccgattgcctatttc
ttctatgttcgtaagcagcctgttcttaaagtttctgctgcacttatgcctgttatcggt
gaagcaaacagctttggcaaactcggtaaagttatcgacattctatttatctttggtcta
ttggggggagctgcaaccacactaggtttagctgcacctttgatcaatgaagggataagt
tatctgttcggcatccccacatccacaggcagccagattggcgtactcttactttgtacg
gccatatttgcttactcatcctataaagggatggacgaagggattaaagttctaagtaac
ataaacttctggggcgcgttaggcctactggcttttgttcttgtctgcggtcctaccatc
tttatgttagagacaggtttagactctattggtcgcatgctatctaacttttttgttatg
gcgacttgggcagaaccttttggtggtttaggaacctttgctgatactcacttccctcaa
gattggaccatattctattgggcttggtggttggtatttgcaccgagtatgggcctgttt
gttgcgcgtatctctcgcggaagaaccattaaacagatggtatctggagccgtattcttt
ggctcgctaggttgtgcaatgtactttatgatcttaggtaactacggattatcactgcag
ttatcgggtcagctcgatgtggtcggcatactgaactcagaaggggcaacccgcgctatc
ttctctatcttagagcagctaccgtttagcaccttgatcatcgctctatttaccttgcta
tgtatcatcttcactgcaaccactttcgactctatctcctatattctggcgtcggtggta
cagacaaatgtcactgaagacccaatgcgttggaaccgacttttctgggcctttaccctt
tcgtttatgccttcagttctgatgtttatgggtggcttagccacactacaaaccgctgcg
attgtaggagggttacccctacttgttatcgcgatcatgttgatgatctcaggcgttaaa
gcagccatgttagatctgagccatcaggatgattatgtggatccagtgatcaatatctct
gatctaccagaggtcgatccttggagtaaagagggccaagcccttgctcgttttgagctg
ttacgagataacgctattgaggctgctaacttagagcgcgaagccatagatgctatctgg
ttgctaaagaaacaactacgcagggaagctctatctcgtggtgagtcgagcttagagctt
ggcaatgctccggatgagatcattacagagttacgccaactcactgaggatgcgatgaaa
gccaaagagcgcaagctagaagcttcagaacaagctcaagcagctagaagctcttttaac
gagcttatgcgtgacaaggaggagggtgaactctcgttggcccaagaggaagctaaagcc
gcgattcaagcaagattgaatacaccaggctaa
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