Shewanella woodyi: Swoo_4150
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Entry
Swoo_4150 CDS
T00676
Name
(GenBank) UBA/THIF-type NAD/FAD binding protein
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
swd03016
]
Swoo_4150
Transfer RNA biogenesis [BR:
swd03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Swoo_4150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiF
Sacchrp_dh_NADP
3HCDH_N
DAO
NAD_binding_7
Pyr_redox_2
UDPG_MGDP_dh_N
ApbA
ELFV_dehydrog
Shikimate_DH
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
ACA88406
UniProt:
B1KHS8
LinkDB
All DBs
Position
complement(5049486..5050301)
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AA seq
271 aa
AA seq
DB search
MEKMVLSEAYINRFAGIGRLYGQKALNRFAQSHVAVVGIGGVGTWVAESLARSGIGEITL
IDLDDICVTNTNRQIHALKTTIGESKVEVMAERILQINPDCKVNQVEDFITPENLGDYFI
GRKQEGDLDFVVDCIDAVKPKAALIAWCKRQKLPIVTVGGAGGQVDPTQIQITDLAKTYQ
DPLLAKVRNILRREYNFSKNLQRRFSIEAVFSTEQLVYPQADGSVCNTKADAEGSMRMDC
ASGFGAVTVVTGTFGFIAASRVLIKLAKKAD
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaagatggtgctttctgaagcctatattaatcgttttgctggtattggtcgttta
tatggccaaaaagccctgaatcgatttgctcaatctcatgttgctgtggttggcataggt
ggtgtgggaacttgggttgcagagtctttagccagaagtggcatcggcgagatcaccttg
attgatctcgatgacatctgtgtgacaaatactaaccgtcaaatccatgctctaaaaacg
acaataggcgagtctaaagttgaggtgatggctgagcgtattttacagatcaatccagac
tgtaaggttaatcaggttgaagattttattacgccggaaaatctaggtgactactttatt
ggtagaaaacaggaaggggacttagattttgtggtcgattgtatcgatgctgtcaaacct
aaggcggctttgatcgcttggtgtaagcggcagaaactgcctattgttaccgttggagga
gctggtgggcaggttgacccgactcaaatacagatcactgatcttgctaagacctaccaa
gatcctttgttggcaaaagtgcgtaatatattaagacgtgagtataatttttctaaaaat
ctacagcgacgttttagcattgaagcggtgttttcaactgagcaactggtttaccctcag
gcggatggcagtgtatgtaacactaaagccgatgctgaaggaagtatgcgcatggattgt
gcttctggttttggtgcggtgaccgttgttacaggtactttcggttttattgctgctagt
agagtactgataaaattagctaaaaaagctgactga
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