Shewanella woodyi: Swoo_4172
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Entry
Swoo_4172 CDS
T00676
Name
(GenBank) DNA mismatch repair protein MutL
KO
K03572
DNA mismatch repair protein MutL
Organism
swd
Shewanella woodyi
Pathway
swd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Swoo_4172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
swd03400
]
Swoo_4172
DNA repair and recombination proteins [BR:
swd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Molecular matchmaker
Swoo_4172
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
MutL_C
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
ACA88428
UniProt:
B1KHV0
LinkDB
All DBs
Position
complement(5073614..5075458)
Genome browser
AA seq
614 aa
AA seq
DB search
MTIQILSPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIDKGGSKLIKIQDNG
SGIPKSELNLALSRHATSKLSTLDDLDAILSFGFRGEALASISSVSRLTLTSRTAEQTEA
WQAYAEGSDMAVKVIPAAHPVGTTIEAVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIAL
VKPEIHFTLKHNGKQVRNYRPANNQDQYLMRLAQICGKNFAEQAIEIDCQHEGLTLSGYI
QSPFFTSPASDTQFFYVNGRLIRDRLVNHAVRQAFSEHGTGELASYVLMLEIAPHQVDVN
VHPAKHEVRFHQSRYVHDYILQALQSALMQVARASISLPEEKLVEFVEDDWHSKPLSTGR
VSEADPSNYATQSKFDEKPRESGSQGQSSSISAPSSYSRGGEYSARSQPELPSASEIASY
TQLLKTPQTAQASKLVNSDLKTPMPPVLAGQYWVYAGDELSLLPIDIVAKWLVKRDILAK
IDNGLVSQPLLMPVSIKVDEDWLNTIDEREQLLRQLGIEITIRLGQLIIKKVPPYLRQSQ
LVTVIPELLQWVRFEEPTHEALALWLAKQDDGKFESAVATWSAFSQLDDEIQQELAQKAK
VLPWQSWLEEQLSD
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgactatacagatactgtcaccacaattggcaaaccagatcgctgctggggaggttgtc
gagcgacccgcttcggtgattaaagagttggttgaaaatagcctagacgctggggctacc
cgtgtcgatattgagatcgataagggtggcagtaagctaataaaaatccaagacaatggc
tctgggatccctaagtcagaactgaatttagcgctatcaaggcatgcaacttcaaagttg
agtactttagatgacttagatgcaattttaagttttggttttcgtggcgaggcattagcg
agtatcagttcggtttctcgtttgactttgacctctcgaacagcagagcaaactgaagct
tggcaagcttatgccgaaggttcagatatggctgtgaaagtgatccctgccgctcatcct
gtcggaacgacgatagaagcggttgatctattttttaatactccagccagaaggcgattt
ctcaaaagtgataaaacagagtttacccatattgatgaatggcttaaacgtattgcttta
gttaaacctgagatccatttcaccttaaaacacaatggtaagcaggttcgtaactatcgt
cctgcaaataatcaagatcaatacttgatgcgtttagcacagatctgcggcaaaaacttt
gctgagcaagccattgagatagattgtcaacatgaaggcttaacgttaagtggctatata
caatccccattttttacctctccagctagcgacacacaatttttctacgtcaacggtagg
ttaattcgtgacagattagtgaatcatgcggtgagacaggcattttcggaacatggaaca
ggggagttagctagctatgtgctgatgttagagattgctcctcatcaggttgatgttaat
gttcacccagcaaagcacgaggtgaggttccaccaaagccgttatgtacatgattacata
ctccaggctttacagtctgcattgatgcaggtagctagagcctcaatctctcttccagaa
gagaagctggtcgagtttgtcgaagatgattggcatagtaagcctttatcaactgggcgt
gttagcgaagccgatccatcaaactacgcaacacagtctaagtttgatgaaaagccaaga
gagagtggttcacaggggcaatcgagttcaatttctgctccatcatcctactcaaggggc
ggggagtatagcgcccgttctcagcctgaactgccttcggcgagtgagatagcctcttat
actcaactattaaaaacacctcagacggcacaagcatctaaattagttaatagtgactta
aagactcctatgccgccagtgttagcaggccaatattgggtctatgctggtgatgagctt
tctttgctgccgattgatatcgtcgcaaagtggctcgtgaagcgtgatattttagcaaaa
attgataatggtttagtcagccagcctctccttatgcctgtttcaataaaggttgatgaa
gattggctcaatactatcgatgagagggagcaactgttaaggcaattagggattgagata
actattcgtcttgggcagttgattataaagaaagtgcccccatatttaagacagagccag
ttagttactgttattcctgaattgttgcaatgggtaaggtttgaagagccgacccatgaa
gcgctagcgttgtggttagcaaagcaagatgatggaaagtttgaatctgcagtagcaact
tggtcagcatttagtcagttggatgatgagatccagcaagaattagcacagaaggctaag
gtattaccttggcagtcatggttagaagagcagttgagtgactga
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