Shewanella woodyi: Swoo_4173
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Entry
Swoo_4173 CDS
T00676
Name
(GenBank) N-acetylmuramoyl-L-alanine amidase
KO
K01448
N-acetylmuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
swd
Shewanella woodyi
Pathway
swd01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
Swoo_4173
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
swd01011
]
Swoo_4173
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
swd03036
]
Swoo_4173
Enzymes [BR:
swd01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
Swoo_4173
Peptidoglycan biosynthesis and degradation proteins [BR:
swd01011
]
Peptidoglycan biosynthesis and degradation
Amidase
Swoo_4173
Chromosome and associated proteins [BR:
swd03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Swoo_4173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_3
AMIN
LysM
LysM3_LYK4_5
LysM1_NFP_LYK
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-ProteinID:
ACA88429
UniProt:
B1KHV1
LinkDB
All DBs
Position
complement(5075520..5076839)
Genome browser
AA seq
439 aa
AA seq
DB search
MIKIASFLQFFLLSVTLCSSFFVHSANKLDGVRIWAAPESTRVVFDLNKAPDFSYFTLTG
PYRLVVDLKGTSTSVNLSKLANNSKLVKRVRISKPPSKGTLRLVIDLTKPVKSNLFSLPP
TAPYGNRLVVDLDDSGSKKVVQTSQPKAKLRDVVVAIDAGHGGDDPGSIGPSGIYEKKVV
LEIAKKVEAKINATPGMRAVMTRTGDYFVNLNKRSEIARTSKADLLVSIHADAFTSPQPR
GASVWVLSMRRANSEIGRWLEHKEKHSELLGGAGEIIQNTDNEQYLAMTLLDMSMDRSMA
ISHNIADDVLSNLGRVTKLHKHKPESASFAVLKSPDIPSILVETGFISNHKEERLLSQRE
HQNNIAKAVHKGVLKYFEANPPVNSLMASKGSFKHNVRKGESLSVIAHKYQVSIASIKRA
NGLKSNTLRIGQKLVIPRA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaatagcgtcgtttttacaattttttctattgtcggtgaccttgtgctcatct
ttctttgtccatagtgctaataaactggatggagtgagaatttgggctgcacctgagtcg
actcgagtcgtttttgacctgaataaggctcctgatttcagttatttcacgttaactggt
ccctatcgacttgttgttgacctgaaggggacctccacctcagttaatctcagcaaactt
gcaaataatagtaaattagtcaaaagagttcgcattagtaagccaccctcgaagggcact
ttaaggctggttattgatctgacaaagcctgttaaatcaaacctgttttctctgcctcca
acggccccttatggtaataggttagttgttgatcttgatgatagcggctcaaagaaggta
gttcagactagtcagcctaaagccaagctcagagatgtagtggttgccattgatgcgggt
catggtggtgatgatcctggatcaattggaccttcgggaatttatgagaaaaaagtggtg
ttagagatcgctaagaaggtcgaggcgaaaatcaatgctacgccgggtatgagggctgta
atgacgcgtaccggagattacttcgttaatcttaataaacgttctgaaatcgcccgtacc
agtaaagccgatctacttgtgtctattcacgcggatgccttcacttcgcctcaacctaga
ggagcttctgtgtgggttttgtctatgaggcgtgctaacagtgagatcggtcgttggctt
gagcataaagagaagcattcagagttgcttggtggcgcaggtgagataatccagaatacg
gataacgagcaatatttagcgatgacgctgctcgacatgtccatggatcgctctatggcg
atcagccacaatattgctgatgatgtactgtcaaatttaggaagagtgaccaagttgcat
aaacataagccggagtcggcgagttttgcggtattgaaatctcctgatattccctcaatt
ttggtcgaaacaggatttatttcgaaccacaaagaggagcggttactctcgcagcgagag
catcaaaataatattgctaaggcggtacataaaggtgtgctgaaatattttgaggctaac
ccgccggttaactccttgatggccagtaagggttcgtttaagcataatgtccgtaaaggt
gagtcactatctgtgatagcgcataaatatcaagtgtcgattgccagtataaaacgggct
aatggcttaaaatctaataccttaagaataggccaaaagttggttattcctagggcgtag
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