Shewanella woodyi: Swoo_4182
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Entry
Swoo_4182 CDS
T00676
Name
(GenBank) MscS Mechanosensitive ion channel
KO
K22051
miniconductance mechanosensitive channel
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swd02000
]
Swoo_4182
Transporters [BR:
swd02000
]
Other transporters
Pores ion channels [TC:
1
]
Swoo_4182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
ACA88438
UniProt:
B1KHW0
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All DBs
Position
5084855..5088067
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AA seq
1070 aa
AA seq
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MFQTIRAILLLTFFLFTLSAHSANPLDLNKKLGINQTQGENLTAEEKLAHIERNTNELAE
VEKNYIDLINNYESHKLNIEHQLQEAQAPLIWSKNQGLTQQASFAYLRLSELKEIEAELH
GKITLLLKEHNQLPSKIISARKALTAHSKNKIKETGNIEEKLLVAQRQLYTQSLSTLEAE
LASSQKRINLNQQQMQLVRKQLSQQESLIESINSEMAQQRQHKTDSTIAKSLIETANEQN
PLTQELSQKNREYADELKKLTLLTNEAIKQQEKAENLYQQQAKQLTNIQQQISWIKLSSA
FGERFLQILQSLPSVPDQEKLQTKIANSRLIKYQLEQDQTLNGQQLQSIGSFTLIQNQLL
NSQHDLLVQLLQGYDLYLSELADLRVIYEQLTQQNLTIKSTLNEHLFWVPNANSIGKLWF
TDLLQSTQWLIAQQPLTQVSASISTQSTLWSWWLILLIVSLIAQDILTPKFNKTLEQDAA
FVGNVTQDSFFYTLRALVNTFIYSIFKPSPIVLAGIIMLKSEQNMVSAIGMGVLVIGLVY
LLYRFSYLLALNNGLLISHFKGHEALIRKGQLKLKAFTLTTIPFFGIMGVTEVINNSVLR
NSIGRGAFIIFCILLFMFYKEILSISKREYHAHQDGKNKKLLQRLLWAILLLVPPVCAVL
AFKGYYYTAFQMLLQLQISLLLSLGFMLLYQLTKRWMLIERRRIAFDRAKARRAEILSQR
ERGEETQSSSDPLDTYEEPQVDLETISSQSLGLVRSLLILAFLVSLVGLWTQTHTALFSL
LDGITLWTSNTTINGIEQPLPITLKSLLLGLIIVGFSLMIATNLPGLIELTILQRLDLTQ
GTGFAITTVSRYLVIFFGILSGFSTLGMEWSKLQWLIAALSLGLGFGLQEIFANFISGLI
ILFEKPVRIGDTVTIRDLTGTVSKIQIRATTIIDWDRKEIIIPNKAFITEQLINWSLSDP
ITRVIVYVSVARDSDPARVEASLYQAVKECDEALEIPEPEVWFAGFGKHTQDYEVRAYAK
DMNTRWPLRHKLHKEISKKLRENNLELAFPQLEVHISNTHNKDTQGLIRT
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaactatccgcgcaattttactgcttacctttttcctcttcaccttgagtgct
cactctgcaaatcctttagatttaaacaaaaaattagggataaatcagacgcaaggcgaa
aacctaaccgcggaagagaaactcgctcacatagagcgcaataccaatgaactagccgaa
gtagagaagaactatattgatttaatcaataactatgagagtcataagctcaatattgaa
catcaactacaggaagcacaagctccattaatctggtctaaaaaccaggggttaacacaa
caagcctcatttgcttacttgcgcttatctgaattaaaagagatagaggctgaacttcac
ggcaaaatcacccttctattaaaagagcataatcaacttccaagtaagatcatcagtgca
agaaaagcactcaccgcccacagcaagaataagatcaaagaaacaggcaatattgaagag
aaacttctggttgcgcaacgccaactctatactcaaagcctatcgacacttgaagctgag
cttgccagtagtcaaaagcgaatcaacctcaatcagcagcagatgcaacttgttaggaaa
cagctctctcaacaagagagcctcattgagtcgattaatagcgagatggcacaacaacgc
caacacaaaacagactcaaccattgccaagagtctgatcgaaacggctaacgaacagaac
ccactgacacaagagctaagccagaaaaatcgtgaatacgcagatgagctaaaaaaatta
actctcctaactaatgaggccattaagcagcaagagaaggctgaaaacctttaccaacaa
caagcaaaacaactaacaaatatccagcaacagatcagttggattaaattaagctcagcc
tttggcgaacgctttttacagatactgcaatcgctcccctctgtaccagatcaagagaag
ctacaaactaaaatagccaatagcagactgataaaatatcaattagagcaagatcaaaca
ttaaatggccaacagctacagtcaataggctcctttactctcattcagaatcagttactt
aattcacaacatgatctattggtgcaactgcttcaaggttacgatctctatctgagtgag
cttgccgatcttagagttatttatgagcaactaactcagcaaaatttaaccataaaaagt
actcttaatgagcacctattttgggtccctaatgcaaactcaataggcaagttatggttc
actgatctgctgcaaagcactcaatggttgattgctcaacagccattaactcaagtatca
gcctcgatcagtacccaaagtaccctatggtcatggtggcttattcttttaattgttagc
ttaattgctcaagacattctgacacccaagtttaataaaaccttagagcaagatgcagcc
tttgtggggaacgtgactcaagatagctttttctacactttaagagcactcgttaatacc
tttatctacagtatctttaagccatctcccattgtactcgctggtatcatcatgctgaag
tcagagcaaaatatggtatcagcaattggcatgggggtcttagtcatcggcttagtctat
ctgctatatcgtttctcttacttacttgcactcaataatggcttattaattagtcacttt
aaaggtcatgaagcgctcatacgtaaggggcagctcaagctaaaggcgtttacactcacc
acgattcctttcttcggaattatgggagtcactgaggttatcaataactcagtcttgaga
aacagcataggaagaggcgcctttattatattctgtatcttactgtttatgttctataaa
gagatactgtcaatttccaaacgtgaatatcatgcccatcaggatggcaagaataagaaa
ctattacagcggttgttatgggcaattcttctactcgttccgcctgtttgtgccgtttta
gctttcaaggggtactactacacagcctttcaaatgctgctgcagttacagatctcactc
ctgctctctctcggcttcatgttgctttaccagttaactaaacgctggatgttaatcgaa
cgccggcgcattgcattcgatcgcgctaaagctcgacgagcagagatactgtcacagcga
gaaaggggggaagaaacacaaagcagcagtgatcctttagatacctatgaggagcctcag
gtcgatttagagacaatttcaagccaatcccttggtttggttcgttccttgttgatttta
gccttcctggtgagcttagtgggcctatggactcaaactcatacagcattgttctcttta
ctcgatgggatcactctctggaccagtaatacaactattaatggcatagaacaacctcta
ccaataacccttaaatctctgctgctaggactgataatcgtcggcttctcactcatgata
gccaccaatttacccggcctcatagagttaaccattttacagcggctggatctgacccaa
ggaactggctttgctatcaccacggtcagccgctatttagttatcttctttggtatttta
agtggcttctccaccttaggaatggagtggtcgaagcttcaatggctcattgctgcgctc
tctcttggcttaggttttggtctacaggagatctttgccaactttatctccggtctgata
attctatttgaaaagccagtacgtattggcgataccgtcactattagggatctcaccgga
accgtaagtaaaattcagatccgtgcaacaaccattatcgattgggatagaaaggagata
attatccccaataaggcgtttattaccgagcagttgattaactggtctctctccgatcct
ataactcgagtgattgtttatgtctcagtagctcgagattctgatcccgctcgtgttgaa
gcctcgctttaccaagctgtcaaagagtgcgatgaggctttggagatcccagagcctgaa
gtctggtttgctggctttggtaaacacacccaagattatgaagttcgagcgtacgctaaa
gatatgaatacccgatggccacttcgtcataaactccataaagagatcagtaaaaaactg
agggaaaataatctggaattagccttcccacaactggaagttcatatcagcaacacccac
aataaagacactcaaggactgataagaacctaa
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