Shewanella woodyi: Swoo_4206
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Entry
Swoo_4206 CDS
T00676
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
swd
Shewanella woodyi
Pathway
swd00470
D-Amino acid metabolism
swd01100
Metabolic pathways
swd01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Swoo_4206
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Swoo_4206
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
swd01011
]
Swoo_4206
Enzymes [BR:
swd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
Swoo_4206
Peptidoglycan biosynthesis and degradation proteins [BR:
swd01011
]
Precursor biosynthesis
Racemase
Swoo_4206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
CmlS_C
Motif
Other DBs
NCBI-ProteinID:
ACA88462
UniProt:
B1KHY4
LinkDB
All DBs
Position
complement(5110197..5111273)
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AA seq
358 aa
AA seq
DB search
MKPFPRAEISAQALKNNLSRLRQIAPNSSVMAVVKANGYGHGLLNVASCLTEADGFGLAR
LEEALALRAGGVKAKLVLLEGFFRQVDLTTLVEHGIDTVIHNEVQLDMLENASLSKPVTV
WLKLDSGMHRLGFTPEQFAQVYARLEACPQVAKPINIMSHFACADEPDNPMTQEQLQVFE
ALTKNSKGYRTLANSAGTLYWPDSQADWIRPGIALYGVSPVIGDLGRNHGLEPAMKLVSQ
LIAVREHKAGQPVGYGCFWHAKADTRLGVVAIGYGDGYPRNAPEGTPVWVNGRRVPVVGR
VSMDMLTVDLGIDAKDSIGDDVVLWGKELPVEEVAEHIGTIAYELVTKLTPRVAVCLD
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaccctttccccgtgcagagatcagtgcgcaagcattaaaaaataacttatcgcgc
cttcgccaaattgcgcccaatagcagtgttatggcggtggtaaaggcgaatggttatggc
catggtttactcaatgtcgctagctgccttaccgaggctgatggtttcgggcttgctcgg
ctagaggaagcgttagcgttaagagcaggtggcgtgaaggcaaaacttgttttgctggag
ggctttttcagacaggtggatctcactactttggttgagcatggtatcgataccgttatc
cataacgaagtgcagttggatatgttggaaaatgcctccctctctaagcctgtcacggta
tggttaaaattagattctggtatgcacagacttggctttacacctgagcagtttgcacag
gtctacgcacgccttgaagcgtgtcctcaagtggccaaacctatcaatatcatgtctcac
tttgcctgcgccgatgaacccgataatccgatgacacaggagcagctacaggtttttgag
gcgttgacaaaaaattcaaagggctaccgtacactggcaaactctgccggcactctgtat
tggcctgatagccaagctgattggataaggcctggtattgcgctttatggtgtttcccct
gttatcggggatcttggacgtaatcatggtttagaacctgccatgaagcttgtgtctcag
ctcattgcggtcagagaacataaagcgggtcaacctgttggctatggctgcttttggcat
gcaaaagccgatactcgactaggtgtcgtcgcaataggctatggcgacggctatccccgt
aatgcccctgagggaacgcccgtttgggtcaatggccgccgcgttcctgttgtggggcga
gtctctatggatatgttgacagtggatcttggcatcgatgccaaagatagtattggtgat
gatgtcgtcttatggggaaaggagttgcccgttgaggaggtggctgaacatattggcacg
attgcctacgagttggtcactaagctcactcctagagtcgctgtttgcttagactag
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