Shewanella woodyi: Swoo_4207
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Entry
Swoo_4207 CDS
T00676
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
swd
Shewanella woodyi
Pathway
swd03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Swoo_4207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
swd03032
]
Swoo_4207
Enzymes [BR:
swd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Swoo_4207
DNA replication proteins [BR:
swd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Swoo_4207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
AAA_33
GvpD_P-loop
CbiA
divDNAB
Motif
Other DBs
NCBI-ProteinID:
ACA88463
UniProt:
B1KHY5
LinkDB
All DBs
Position
complement(5111283..5112689)
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AA seq
468 aa
AA seq
DB search
MSQQGAFKAKKKPRDIQMDALKMPPHSLEAEQSVLGGLMLDSDAWDRVAEAVVAEDFYSR
SHRMIFNAMEALIAAGQPLDLITVSEQLEVEDQLEEAGGFAYLGEIAKNTPSAGNILSYG
DIVRERAVVRDMIKVANEIADAGFNPEGRNSSELLDLAETKVFKIAESRANANEGPEGIK
VILEKTVDKIEALYNNPTGGVTGVSSGFGDLDKMTAGFQSGDLIIVAARPSMGKTTFAMN
LCEAAALNEDKPVLIFSLEMPSEQIMMRMLASLGRVDQTKIRTGQLDDDDWARVSSTMGI
MLEQGKMYIDDGSGLTPTEVRSRARRIAREHGGLSMIMIDYLQLMQVPALKDNRTLEISE
ISRSLKALAKELEIPVIALSQLNRSLEQRADKRPVNSDLRESGAIEQDADLIMFIYRDEV
YNDDSEHKGVAEIIIGKQRNGPIGRVPLTFQGQFSRFDNYAGPQFEED
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaacaaggtgccttcaaggccaaaaagaagcctagagatatccagatggatgca
ctcaagatgccgccgcattcattagaagcggagcagtctgtactgggtggactcatgcta
gattccgatgcttgggatcgagtggccgaagcggttgtggcggaagatttctattcacgc
tctcatcgaatgatcttcaatgcgatggaagccttgattgctgccggtcaacctctggat
ttgatcaccgtttctgagcagttagaggttgaagatcaactcgaagaagcgggtggtttc
gcgtatttaggcgagattgctaagaatacgccaagtgcaggtaacattctctcctatggt
gacattgttcgtgagcgagcggtggttcgcgacatgatcaaggttgccaatgagatagcc
gatgcaggttttaatccagaagggcgtaactcaagtgaactgctcgaccttgctgaaact
aaagtctttaagattgccgaatctcgcgccaatgccaatgaaggtcccgaagggatcaag
gtgatcctcgaaaagactgtggataagattgaagcactatataacaacccaactggcggt
gtgacaggggtttcaagtggttttggtgatcttgataagatgactgcgggtttccaatcc
ggtgacttgattattgtggctgcccgtccatctatggggaaaaccacctttgcgatgaac
ctgtgtgaagccgccgcccttaatgaagacaaacctgtgcttattttcagtctggagatg
ccttcagaacagatcatgatgcgtatgttggcctcattgggccgcgttgaccaaactaaa
attcgtaccggtcaactcgatgatgatgattgggcccgagtgtcctctaccatggggatt
atgctcgaacagggtaagatgtatatcgatgatggctcaggtttaacaccgacggaagtt
cgaagtcgtgctaggcgaattgcccgtgaacatggtggcctgtctatgatcatgatcgat
taccttcagttgatgcaggtacccgcgctaaaagacaaccgtaccttagagatctccgag
atttcccgctcgcttaaggcgcttgctaaggagctggagatcccagttattgcgctttct
cagcttaaccgttctttggagcaacgtgcggataaacgtccagtaaactcggatcttcgt
gaatctggagcgattgagcaagatgccgacctcatcatgtttatctatcgtgatgaggtt
tataatgatgattctgaacataaaggtgttgctgagatcattattggtaagcaacgtaac
ggccctattgggcgcgtacctttaactttccaaggtcagttttctcgttttgacaattat
gcaggtccgcagtttgaagaagattaa
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