Shewanella woodyi: Swoo_4236
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Entry
Swoo_4236 CDS
T00676
Name
(GenBank) 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family
KO
K03270
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:
3.1.3.45
]
Organism
swd
Shewanella woodyi
Pathway
swd00541
Biosynthesis of various nucleotide sugars
swd01100
Metabolic pathways
swd01250
Biosynthesis of nucleotide sugars
Module
swd_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Swoo_4236
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
swd01005
]
Swoo_4236
Enzymes [BR:
swd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.45 3-deoxy-manno-octulosonate-8-phosphatase
Swoo_4236
Lipopolysaccharide biosynthesis proteins [BR:
swd01005
]
Lipid A
Swoo_4236
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Gene cluster
GFIT
Motif
Pfam:
Hydrolase_3
Hydrolase
HAD_2
Motif
Other DBs
NCBI-ProteinID:
ACA88492
UniProt:
B1KIJ6
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All DBs
Position
5138633..5139184
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AA seq
183 aa
AA seq
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MSHQGFYGPIEDTVWQKASKIKLLICDVDGVFSDGLVYMSNTGDELKTFHTRDGYGVRSL
LTSDIPVAIITGRKSKIVEDRMTALGITHIYQGVDDKLTPYQELLSLYKVTPEEVAYIGD
DMVDLPVMKQVGLSVCVADGHPYVQQGADFVTHIKGGHGALRELTDLLLLSQNKFETAHG
MSI
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaccaaggtttttacggtccaatagaggatactgtttggcaaaaggccagtaag
atcaagcttctaatatgtgatgtagatggagtattctccgacggtttagtctatatgagt
aacacgggcgatgaacttaaaaccttccatacccgtgacggttacggcgtcagatctctg
ctcaccagtgatattcctgtcgccattattaccggcagaaaatctaagattgtcgaagat
cgcatgacagccctagggatcacccatatctatcaaggcgtcgatgacaaactgactccc
tatcaggagctactctctttatacaaggtaacgccagaagaggtcgcatatatcggcgat
gatatggttgacctaccagtgatgaaacaggttggtttatcggtatgtgttgctgacggc
catccttatgttcagcaaggtgccgattttgttactcatatcaagggaggccacggcgcc
ctacgtgagttgacagatctactgcttcttagccagaataagttcgaaacggctcatgga
atgagtatatga
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