Shewanella woodyi: Swoo_4264
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Entry
Swoo_4264 CDS
T00676
Name
(GenBank) fumarate lyase
KO
K01679
fumarate hydratase, class II [EC:
4.2.1.2
]
Organism
swd
Shewanella woodyi
Pathway
swd00020
Citrate cycle (TCA cycle)
swd00620
Pyruvate metabolism
swd00720
Other carbon fixation pathways
swd01100
Metabolic pathways
swd01110
Biosynthesis of secondary metabolites
swd01120
Microbial metabolism in diverse environments
swd01200
Carbon metabolism
Module
swd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
swd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
swd_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Swoo_4264
00620 Pyruvate metabolism
Swoo_4264
09102 Energy metabolism
00720 Other carbon fixation pathways
Swoo_4264
Enzymes [BR:
swd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
Swoo_4264
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_1
FumaraseC_C
DUF3461
Motif
Other DBs
NCBI-ProteinID:
ACA88520
UniProt:
B1KIM4
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All DBs
Position
complement(5167468..5168844)
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AA seq
458 aa
AA seq
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MTTRIEKDSMGELEVPASALYGAQTQRAVNNFPISGKTMPEPFIRALLLAKSAAAQANGK
LGLLPLEMADGISGAVNQLLNEQNMMQHFPVDVFQTGSGTSSNMNANEVLATLASELTEQ
AVGANDHVNFGQSSNDIIPSCIHISAAIELDKQLLPGLRHLLQVIKSKANEVDRFVKTGR
THLMDAMPVRMSQSLLSWASQIEQNIELIEGIRPKLQSLAQGGTAVGTGINAHKEFAAEF
SRQLSNVTGLAFTPADNFFSHIGTQDIAVSLSGQLKTTAVSMMKIANDLRWMNSGPLAGL
GEIELEALQPGSSIMPGKVNPVIPEAAAMVAAQVIGNDSAITVGGQAGNFELNVMLPMIA
DNLLSSITLLANVSYLLADKAIASFKVNEAQLQKALARNPILVTALNPIIGYAKAAEIAK
KAYKEGRAVLDVAEEETNISRDELERLLDPAKLTLGGV
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgacaacacgtattgaaaaagacagtatgggcgagctagaggtgccagcttcagcgctt
tatggtgctcaaactcaacgggctgtaaataatttccctatcagtggaaagacgatgcca
gagccgtttattcgcgctttattattggctaaatctgccgctgctcaagctaatggaaaa
cttggacttttacccctagagatggccgatgggatctctggtgcggttaaccagttactc
aatgaacagaatatgatgcagcacttccctgtggatgtatttcaaacgggctcaggcaca
agctcgaacatgaatgccaatgaagtattagccacacttgcatccgagctaacagagcaa
gccgtaggcgctaacgaccatgttaactttggccaaagtagcaatgacattatcccctcc
tgtatccatatcagcgccgctattgaactggataaacagctactacctgggcttaggcac
ttgctgcaagtgattaagagcaaagcgaatgaagtggatcgttttgtgaaaacgggccgc
actcacctgatggacgcaatgccagtgcgtatgagtcagagcttgctgagttgggcgagt
caaattgagcaaaatatcgaactgatagagggaataagaccaaagctgcaaagcttggcg
caaggtggaaccgcagtaggtacaggcattaatgcccataaggagttcgctgcagagttt
agccgtcagcttagtaatgtcactggacttgcatttacacccgcagataacttctttagc
catataggcactcaagatattgccgtttcactctctgggcaattgaagacgaccgccgtg
tctatgatgaagatagccaacgatctccgctggatgaactctgggccgttagcaggctta
ggggagattgagttggaggcgttacaacctggctcatcgattatgcctggaaaagttaat
ccagtgatcccagaagcggccgccatggttgcggcgcaagtgataggtaacgacagcgcc
attacagtaggcggtcaagcgggaaacttcgagcttaatgtcatgttgcccatgattgcc
gataatctgctatcaagcattaccttgctggctaacgtcagttacttactggcagataaa
gcgatagccagctttaaggtcaatgaggcccagctacagaaagctctggctcgtaatcct
attctagtgacagcgttgaaccccattatcggctacgccaaggcggcagaaattgctaaa
aaagcctataaagagggcagagcggtactcgatgttgccgaggaggagaccaatatttca
cgtgatgaacttgagcggttattagatcctgccaaactcaccttaggtggtgtgtga
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