Shewanella woodyi: Swoo_4324
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Entry
Swoo_4324 CDS
T00676
Name
(GenBank) SNF2-related protein
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
swd03021
]
Swoo_4324
Transcription machinery [BR:
swd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Swoo_4324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ACA88577
UniProt:
B1KJA5
LinkDB
All DBs
Position
5236336..5239242
Genome browser
AA seq
968 aa
AA seq
DB search
MPFSLGQRWISDTESELGLGTVVAVEGRMVTVMFPATDENRMFSRADAPLTRVIFNPGDK
AESHEGWSLTVSEVEEKDNLIIYHGIHDETGEQVSLRETLLNHNIRFNKPQDRLFAGQID
RLERFGIRYQCQQLRHKLATSDMLGLQGPRVGLIPHQQWIAHEVGRRFAPRVLLADEVGL
GKTIEAGLIIHQQLLTGRAERILVIVPDTLRHQWLVEMLRRFNLKFSVFDEDRCVEAYAD
SDNPFYTEQLVICSLELLRKKRRLDQALAADWDLMVVDEAHHLEWTEDAPSRAYRIVEAL
SEEIPGVLLLTATPDQLGHQSHFARLRLLDPDRFYDYEAFLKEETNYADIASTADALAGN
EPLSQEIIDNLKTQLAEKDITAATDIIQATDADVDQQQAARDALLQDLLDRHGTGRVLYR
NSRASVKGFPTRIFNQYPQKMPAQYVTAARVGAMMNGHLDTAGKVKQALSPEKIYQEFES
SSASWWKFDPRVDWLIDFLKENRREKVLIIASQAETALSLEEALRTREGIQATVFHEGMS
IIERDKAGAYFAQETGGAQALICSEIGSEGRNFQFASQLILFDLPLNPDLLEQRIGRLDR
IGQNNDVSIHVPYLEDTAQESLMQWYHKGLNAFEQTCPSGHILFNEFSESLLNVLISQDK
EVLEQVLSDTQTRYAELKSVMEQGRDKLLEINSHGGERANKLVNALAERDEDTNLIGSVI
RLWDIIGVEQEDSGENAIVLRPSEHMMFPTYPGLPEDGITVTFDREMALSRDDIALITQE
HPLVQTGLDLITSSETGTTSVAVLKNKSLPAGTIFLELIYMADASAPKSSQLYRYLPPTP
VRVLLDKNGNNLADNVNYESFNKQLSAVNRHIASKLVNASQAVLHPLFAKGEEFASSELT
LLTESSRAKMTTQLNGELERLEALKAVNPNIRDEELAHLREQMVELNGYLDGAVLQLDAI
RLVLVSHA
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgcccttttccttaggtcaacgctggataagtgacacagaatctgaactcggtttaggt
actgtcgtggctgtggaaggccgtatggtcaccgtgatgtttccagcaacagatgagaac
cgtatgttctctcgagccgatgcgccgttaacacgtgttatttttaatccgggcgataaa
gctgaaagccatgaaggctggagtttgaccgttagtgaagttgaagagaaagataatcta
attatctatcatggcattcatgatgaaactggtgagcaggtcagcttaagagagaccctg
ttaaaccacaatattcgtttcaataagccacaagacagattgtttgctggccagatcgat
cgcctcgagcgatttggtattcgttaccagtgccagcaactaagacacaaactagccacc
tcagacatgctaggcctacaaggccctagagtcggcctgatccctcaccagcagtggatc
gcccatgaggtgggtcgccgctttgcgccaagagtattactcgccgatgaggtgggttta
ggtaagacaatcgaagcgggcctgatcatccatcagcagctactgaccggtcgcgccgag
cgtatcttagtaatagtacctgacacacttcgccatcagtggttggttgagatgcttcgc
cgcttcaaccttaagttttctgtttttgatgaagacagatgtgtcgaagcttacgccgat
agcgacaaccctttctacactgagcagctggtaatctgctcattagagctgctgcgaaag
aaacgacgcttagatcaagcactcgctgctgactgggatcttatggttgtcgacgaagcc
catcatttagagtggacggaagatgcaccaagtcgcgcctaccgtatagtcgaagcgctc
agtgaagagatccctggcgtactgctactgacagcaacgccggatcaactcggtcaccag
agtcattttgctcgcctacgcctgctcgatcctgatcgcttctacgattatgaagctttc
ctcaaagaggaaaccaactacgcagatatcgccagcaccgcagatgcactagcaggcaat
gagccgctttcacaggagataattgataatctcaagacgcaactagctgaaaaagatatc
acagcggcaaccgacattattcaagcgactgacgcagatgttgaccagcagcaagctgcc
cgtgatgcactactgcaagacttgttagacagacacggaactgggcgcgtgctctatcgt
aacagtcgcgcctcagtaaaaggcttcccaacgcgtatcttcaatcaatatccacagaag
atgccggcacaatatgtcaccgctgcacgtgtgggcgccatgatgaatggccatctagat
acggcagggaaagttaaacaagcactaagccctgagaaaatataccaagaatttgagagc
tcaagtgcaagttggtggaagtttgatcctcgcgttgactggcttatcgatttcctaaaa
gagaaccgcagagagaaggtgcttattatcgccagtcaggcggaaacagccctaagcttg
gaagaggcactacgtacccgtgaaggtatacaggcgacagtgttccatgaagggatgtcg
attatcgaacgtgataaggccggcgcttactttgctcaagaaacaggtggagctcaagcc
cttatctgttcagagatcggctcagaaggacgtaacttccagtttgctagccagttgatc
ttgttcgatctaccgttaaacccagatctacttgagcagcgtatcggccgcttagatcgt
atcggtcagaacaatgatgtctcgatccatgtgccataccttgaagatacagcgcaagag
tctctcatgcagtggtatcacaaaggattgaatgcctttgagcagacctgtccaagtggt
catatcctgtttaatgagttttcagagtcactgctcaatgtcttaataagccaagataaa
gaggtactagagcaggttttaagtgacacccaaacccgctatgcagagctaaagtctgtg
atggagcagggtcgcgataagttgcttgagataaactctcacggtggtgagcgagctaat
aagctagtcaatgccttagcagagcgcgatgaagataccaaccttatcggttcggtgatc
cgtctgtgggatattatcggtgttgagcaggaagatagcggcgagaatgccattgtgctt
cgcccgagcgagcatatgatgttcccaacttatcctggcctaccggaagatggcattacc
gtcactttcgacagagagatggcgctttctcgtgatgatatcgcgcttatcactcaggag
cacccgctggtgcaaacgggcttagatctgatcacgtcatcggaaaccggcaccacaagc
gtcgctgtgttgaaaaacaagtctctgcctgctggcacgatatttcttgagttgatctac
atggctgatgcttctgcgcctaagtcgagccaactataccgttatctgccacctacaccg
gtgcgtgtcctgctggataaaaatggcaataacttggccgataacgtcaattacgagagt
tttaataagcagctaagcgccgtaaaccgccatattgccagcaagctggtcaatgcatca
caagcagtactgcaccctctgtttgccaaaggtgaagagtttgcatctagcgaattgacc
ttattgactgagagctcgcgggctaaaatgaccacgcaacttaacggtgagctggagcgt
ttagaggcattaaaagcggtcaacccgaatattcgtgatgaggagctagcacacctacgc
gagcagatggtagagcttaacggctacctagacggagcagtactacagctcgatgctata
cgtttagtgctggttagccacgcataa
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