Shewanella woodyi: Swoo_4338
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Entry
Swoo_4338 CDS
T00676
Name
(GenBank) MscS Mechanosensitive ion channel
KO
K03442
small conductance mechanosensitive channel
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swd02000
]
Swoo_4338
Transporters [BR:
swd02000
]
Other transporters
Pores ion channels [TC:
1
]
Swoo_4338
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Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
MS_channel_1st_1
HTH_60
GNAT_acetyltran
DUF7765
Motif
Other DBs
NCBI-ProteinID:
ACA88591
UniProt:
B1KJB9
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Position
5250188..5251789
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AA seq
533 aa
AA seq
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MHRIIALIMLAIVGLSSLPAQADTSSELTSLQTSIQHDVALLSKTHGELTNFTEYKIKQN
TELLHEKLKELMAEPDLNKEMLSPIIKSHLIFIGKVDNYFKTKIATLQGQLGKGDDNKIM
MQLSMLEAERDQQLQAYLDVLGWAKTLGLNTGDQTAQLTKNLIARADGFNSFVQYTQDKL
KQAVKEVSLAGKDVTAEQTLNVTELKERLSYASSSLGVAIHLLDILGQDTADMKETLFKS
SGDITQDVLNIDVASSLFEQWLTSAQNYLIENGPGIVFKLFIFVLILVAASLIGKAVQKL
VRKAVSNSKLKFSVLLQEFFISLSGKATFTLGVLIALSQLGIELAPLLAGFGVAGVIIGF
ALQDTLSNFASGMMILVYRPYDVGDLINAAGVTGKVSHMSLVSTTIKTLDNQRLIIPNNK
IWGDTINNITVEHQRRVDMTFGIGYSDDIEKTEKVLKEIIMAHPKVLKTPEPTIKLHTLG
ESSVDFVVRPWAKPEDYWDVYWDITRTVKMRFDAENISIPFPQRDIHIYQESV
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgcataatcgccttgataatgcttgctatcgtagggcttagtagcttaccggct
caagcagatacatccagtgaactgacatcgctacaaacctctattcagcatgatgtcgca
ctactcagcaaaacacacggtgaactcaccaactttactgagtataaaattaagcagaac
accgaactgcttcatgaaaagcttaaagagctgatggcagagcctgatcttaataaagag
atgcttagcccaatcattaagagtcaccttatctttatcggtaaggtcgacaactacttc
aagactaagattgcgactcttcaagggcaacttggtaagggcgatgataacaagatcatg
atgcaactttcgatgttggaagctgagcgtgatcaacagttacaagcttacctagacgta
cttggctgggcgaagactttaggcctaaatactggtgaccaaacagcgcaactgaccaag
aaccttatcgctcgagcagacggcttcaatagctttgttcaatatacccaagataagcta
aagcaagctgttaaagaggtcagtttagctggtaaagatgtgactgcagagcaaacactc
aacgtcacagagctcaaagagcgcttatcttacgctagctcaagcttaggtgttgctatc
catcttctcgatatcttaggccaagatacagcggacatgaaggagaccctatttaagagt
tcaggagatattactcaagatgtgcttaatatcgatgttgccagtagcttattcgagcag
tggcttacatcagcacaaaactacttaatagaaaatggtccagggatcgtttttaagttg
tttatttttgttctgatcttagtggcagcctctttgataggtaaagccgttcagaagtta
gtcagaaaagctgttagcaactcaaagcttaagtttagcgtgctgcttcaagagttcttt
atctcactctcaggcaaggcaaccttcactttaggtgtcttaatcgccctgtctcaattg
ggaatcgaattagcacccctgctagcaggtttcggtgtggccggtgtgattatcggtttt
gcactgcaagataccctgtctaactttgcatctggcatgatgatcttggtttaccgtcct
tatgatgttggcgatctgatcaatgcagcaggtgttacaggtaaagtcagccatatgagc
ctagtgtctaccacgattaagacactggataaccagagactgatcattccaaataacaag
atttggggtgataccatcaacaacatcacagtcgagcatcaaagacgtgtggatatgacc
tttggtattggctatagcgatgatatcgagaagacagagaaagtactgaaagagatcatc
atggcacatcctaaggttcttaaaacaccagagcctacgattaagctacatactctaggt
gagtcttctgttgatttcgttgttcgcccatgggctaagccagaagattactgggatgtt
tactgggatatcacacgcacagtgaagatgcgtttcgatgccgagaatatcagtattcca
ttccctcagcgcgatattcatatctatcaagagagcgtataa
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