Shewanella woodyi: Swoo_4535
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Entry
Swoo_4535 CDS
T00676
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
swd
Shewanella woodyi
Pathway
swd00470
D-Amino acid metabolism
swd00550
Peptidoglycan biosynthesis
swd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Swoo_4535
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Swoo_4535
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
swd01011
]
Swoo_4535
Enzymes [BR:
swd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Swoo_4535
Peptidoglycan biosynthesis and degradation proteins [BR:
swd01011
]
Precursor biosynthesis
Amino acid ligase
Swoo_4535
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Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
ACA88785
UniProt:
B1KKX9
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Position
complement(5499046..5500374)
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AA seq
442 aa
AA seq
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MENIKSHVVLGLGATGLSVVHYLHEQGITPLVMDSRHQPPGMDELKRLYPEVELLTGGFD
CRYLVQASQIIISPGIAVDTPEIRAAIDMGIEVIGDVELFARAVKDREPCVIGITGSNGK
STVTTLVGEMARVAGLNYAVGGNIGVPALDLLREPRDLYILELSSFQLETTHSLNCIVAT
CLNISEDHMDRYTDLEAYRQAKLSLYCQSKRALFNREDELTEPKDPMNQNSFGLSAPFND
EWGVRDGKVVHGTTEIMNLLDVALVGSHNHANLLAAMALAYHAGVDKESMIQVATTFTGL
AHRCELVAVHNGVSYVNDSKATNVGATVAALEGFSDHLGGIILIAGGDGKGADFQPLQQA
IHGLSQLITLGKDGDKIAEFSEKAIRVSDMSEAVKTANELAEAGDIVLMSPACASLDMYK
NFMARGEDFRAEVNALAGSSDA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatattaagtcacatgtagttttagggctgggagcaactgggctttcggttgtg
cactatctgcatgagcaggggatcactcctttggtgatggatagccgtcatcaacctcca
ggcatggatgaactcaagcgtttatatccagaggttgagttgctgactggcggttttgat
tgtcgttatctcgtgcaagccagtcaaattattatcagtcctggtattgccgttgatacg
cctgagatccgtgcggctatcgatatgggtattgaagttattggggatgtggagttattt
gcccgagcggttaaggatagagagccctgtgtaataggtattaccggttcaaatggtaag
tctacagtgaccacattagttggtgagatggcgagggtagcaggtctcaactatgcagtt
ggtggcaatatcggtgttcccgcactcgatctgcttagagagccaagagatctctatatt
ctagaactctctagtttccagctcgagactacgcacagtttaaattgcatcgtggcgacc
tgtctcaatattagtgaagatcatatggatcgttacacagatcttgaggcttacaggcaa
gcaaaactgtcactctattgccaaagtaaacgtgcgctgtttaatcgagaagatgaactg
accgagccaaaagatccgatgaatcaaaatagttttggattgtcggcaccatttaatgat
gagtggggtgttcgtgatggcaaggttgtgcatggaacaacagagatcatgaacctgctt
gatgttgcgcttgttggtagccataaccatgctaatctgcttgccgctatggcactggct
tatcatgccggagtcgataaagaatcgatgatacaggttgcgacgacctttactggttta
gcacatcgatgtgaattggtggctgttcataatggcgtcagttatgtcaacgactctaag
gctactaatgtcggcgcaactgttgctgcacttgaagggtttagtgatcatcttggtggc
attattttaattgcgggtggagatggaaaaggcgctgattttcagccattgcagcaggct
attcatgggctttctcaactgatcacattaggaaaagatggcgataaaattgctgagttt
tctgagaaagctatccgagttagcgatatgtctgaggcggtaaaaacagcgaatgaactt
gccgaggctggagatattgtattgatgtcgcctgcttgtgcgagcttagatatgtacaaa
aactttatggctcgtggcgaagatttcagagcagaggtgaatgcattagctggaagctct
gatgcgtag
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