Shewanella woodyi: Swoo_4850
Help
Entry
Swoo_4850 CDS
T00676
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K02005
HlyD family secretion protein
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
Swoo_4850
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YknX_C
BSH_RND
BSH_CusB
Beta-barrel_AprE
Biotin_lipoyl
Beta-barrel_YknX
BSH_CzcB
BSH_YknX
CzcB_C
RND-MFP_C
BSH_LcnD
BSH_Fcp1
Beta-barrel_RND_2
Myosin_N
DUF3536
THF_DHG_CYH_C
Motif
Other DBs
NCBI-ProteinID:
ACA89099
UniProt:
B1KPY6
LinkDB
All DBs
Position
complement(5839763..5840920)
Genome browser
AA seq
385 aa
AA seq
DB search
MKKILSFAFILLSVSLLILVSKEKSLSDGLVVDTHVVSEDKINDTILASGNLRFASEIQI
RSEVTGIVDQVYVKEGQLVEKGDLLMELDPEIFIAEVRKARASVEIQLIEIQRLEELANE
AARRAGQYRELLGKGLTDQDTAAQLQSQLKVAKINVRAAKQGLEQYKAILAQSQSRLDKS
RFHAAIDGLISTVDIKEGETVIAGTTNIIGSPLMTLADVDSYVAQIRVDEADVANIELGQ
EVEVFAAATPQMASLGRISSISTSARKDGVNKGLYYKVEVMLQKEQFAYPGMSCRAEIVL
ARSDVELIIPIAAVKQFDGKSYVWVVEENKAVRRNIQLGLSTDTEQIVLSGLSNKEVVIV
GPSRQVKALKEGAEVQHKESYHASL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatattatcgtttgcatttattttacttagcgtctctcttttgatcttggta
agtaaagagaaatctctatctgacggtcttgttgttgatactcatgttgtttcagaagat
aaaattaatgacaccattttggcatctggcaacttaaggtttgccagtgaaattcagatc
cgttcagaggttactggcattgttgatcaagtttacgttaaggaggggcaacttgtagaa
aaaggtgaccttcttatggagttagatccagaaatctttattgctgaggttcgaaaagct
cgtgcttctgttgagattcagctcattgagatccaacgattagaggagctagccaatgag
gccgctcgacgtgctgggcagtatcgagagttattgggtaaagggttaacggatcaagat
actgcggcacaattacagagccagttgaaagttgccaagattaatgtgagagcggcaaaa
cagggattggagcaatataaagctatcttagctcaaagtcagagccgccttgataagtct
cgtttccatgccgcaattgatggtttgatctctactgttgatattaaagagggagaaacg
gttattgctgggacaaccaatattataggtagcccgctaatgactttggctgatgttgac
tcttatgtcgctcagatcagagtggatgaagctgatgttgctaacattgaacttggtcag
gaggtcgaggtatttgctgctgcaaccccacaaatggcttccttgggacggatatcctca
attagtacatctgccagaaaagatggtgtgaataagggcctttactacaaggtagaggtg
atgcttcaaaaagagcagttcgcatacccaggtatgagctgtcgtgccgagattgtttta
gcccgttcagatgttgaattaattatacctatcgctgcggtaaaacagtttgatggtaaa
agttatgtttgggtggttgaggagaataaagctgtaagacgaaatattcagcttggtttg
tctactgacactgagcagatagtgctatcagggctgagcaataaagaagttgtcattgtt
gggcctagtcgccaagtcaaagcgttaaaagagggcgcagaggtacagcataaggagagt
taccatgcatcactctaa
DBGET
integrated database retrieval system
