Formicincola oecophyllae: E3E12_00270
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Entry
E3E12_00270 CDS
T06093
Name
(GenBank) hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
swf
Formicincola oecophyllae
Brite
KEGG Orthology (KO) [BR:
swf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swf02000
]
E3E12_00270
Transporters [BR:
swf02000
]
Other transporters
Pores ion channels [TC:
1
]
E3E12_00270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
QDH12898
UniProt:
A0A4Y6U8K1
LinkDB
All DBs
Position
complement(61796..66598)
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AA seq
1600 aa
AA seq
DB search
MTTHPSSLPGNAEAPQAHPPQKGHLWRALGLGVAVLFGVPLTLAGMALTGVLVAINVPAV
QHWAAQNAGRFTGGMVELAGLSGHLPWDIHLGKLVLRDGKGPWLVLEQAHLRWNPLALVG
LDASVDTLTARELDVIRLPASDPNAKPTPPNPNPLPAISVHVRHLAINHLELGKGVGGVG
CTVAARGHVALSSIAHFRGGLSADNFPATQLALTLSRLDRPGRLGLDFNHSTHGSKPWQG
HVTFEDGQDGFAAMVPVVPGLDPLRLDVDFHGPLTALDVALALHARSGTQAPASQKPANT
VPKPQAPAAPQGVRQGVAPAPTKTIAGQGAEPLLLHVAGQVDVAGQRFHAMRIQASLPEI
HMRRDGQLMGWNSLALQLALNGPWAMPEGQGSLVVQGLSGAGVAVGSIALNFSNPTVLPP
PVGQKTAQENTQKSTAVEPLFSLQGVARDIMLPAGAGAGLLAQAPLKLGLAIKPQAPTQP
YALNVNHPLLQLKANGSLKGRTLQATMALPALAPLAAIAHQALSGSLTANLAAAAPPSGV
MKAALDGTLHLTPPGKAALRPAAAHHKGKRTTTPQRRPRRHGAVPAPRATSQASALQSQL
WGLLGAESHFSLKASKDKTRTTLETLTLKGSAINLTSQGSLTESATPLAASLKTSTPQGK
GHKAPPPLLKAAATLILPDLGRAAPQLEGHSTIRLQASGPLDDFAAQLGMDGALGAHAGR
VHLAPGPLALQVTASHLPTAPQIALHLNGTLDHTPLLAEAQFSRGKSGDMAATIQRLSWK
ALNGQGKLTLAAGHKVPLGRFDLTMGNLDLVQALTGMTSRGHVALHLNTTDDRTPPPLGT
RQTLHVALDGAAQVGPWGLGSLALNGSVAQLPDAPTIMLNAQLRHVAAMGVRGDMALRAQ
GPLSALMFQSGGQFQHVPLNGAAAARLKGPAPQTVAALCGVNLAGLGGLEPPAQSSQGKA
LYGPASFDVAGTLALPLGGKAAQKTALKAPAAKGTAGGGALALQRLKIDVAGDHVRLRNP
ARITWGARTAVEGLNLELAPPKGAPALLGVAGTIKPDLALDVGLRDLTPALANPFLPSLR
AQGRLNGHAHLTGTLEAPSGSVVLDGGGLRLLSASTEAMPAIALAAHADLKAGRAVFKAH
VQAGPKAEVTAQGQASVKGDGPLDARLTGHADLGLANAILGASGMAAAGMLNLDVTARGT
TQHPSLGGQVTLRHGSFNQYALGVDLTAITADILLQDKNVVIKGVTIKAGRGSMGLHGQV
GVLEPAMPLDMWFVMNNAQPLHSDLLTITLDGKIHIFGQARTLLNVDGTVTIPTGTVNIP
SSMPASVPQIAIVKPGLAPTPPAPPAVTVNLNVNVVSPGQFFVRGDGLYAVMAGKLHAGG
TANAPVLQGGFALQQGTFNLAGVNLNFSKGEISFGGTGVAHRLDPTLDFRADRNVEGTLA
TLSVTGYASSPKIKFYSTPPWPQDEVLSMLLFGSMKSSLSPAQMASLGLALVQIGGGSAF
DPLNALRQVLGLDQLNIGGGTGVDNGGAVIEAGKYVAPGIFVGARQGLSGGGGSQAEIKI
DLTKHLVASTTLGTGGQVNGFTTPENDPGTSGSLSYGTDY
NT seq
4803 nt
NT seq
+upstream
nt +downstream
nt
ttgactacccacccctccagcctgccagggaatgcagaagcgccccaagcgcacccaccc
caaaaagggcatttgtggcgcgcgctggggctgggggtggccgtcctgtttggcgtgccg
ctgactttggctggcatggcgctgacaggggttctggtggccatcaacgtgccggcggta
cagcactgggcagcgcagaacgctgggcgcttcacagggggcatggtggagcttgcgggc
ctttcaggccacctgccatgggacattcaccttggcaagcttgtgctgcgtgacggcaag
ggcccctggctggtacttgaacaggcccacttgcgctggaaccccctggccctggtgggg
ctggacgcaagcgtggacacccttacagcgcgggagcttgatgtcatccgcctacctgct
tcagacccaaacgccaaaccaacaccccctaatcccaatccactgccagcaatcagcgtg
catgtgcgccaccttgccatcaaccatttggaactgggcaaaggggtggggggtgtcggg
tgcactgttgcagcgcgtggccatgtggcgttgagcagcatcgcccatttcaggggggga
ctgagtgcagacaacttcccagcgacccagctcgccctcaccctcagcaggcttgaccgc
ccagggcggttggggcttgatttcaatcacagcacccatgggtccaagccttggcaaggt
catgtgacgtttgaagatgggcaggatggcttcgccgccatggtacccgtggtgcctggc
cttgacccgctgcgccttgatgttgatttccatggcccgctcacggcgcttgatgtggcg
ctagccctccatgcccgcagcggcacgcaggcgccagctagccaaaagcccgctaacacg
gtgcccaaaccccaagccccagcagcgccccagggagtgcggcaaggggttgcgccagcg
ccaaccaagaccatagcaggacaaggagcggaacctttgctgctgcacgtggcagggcag
gtggatgtggcggggcagcgtttccatgccatgcgcatccaggccagcttgccagaaatc
cacatgcgccgcgatggccagctgatgggctggaacagcttggcgttgcaattagcgctg
aatggcccttgggccatgcctgaaggccagggcagccttgtggtgcagggtttgtctggg
gctggtgtggccgtaggcagcattgcgcttaatttcagcaaccccaccgtcctcccccca
cctgttggccagaaaaccgcccaggagaacacccagaaatccactgctgtggaaccactt
ttttcactgcagggggtagcgcgtgacatcatgctgccagctggcgctggtgctgggctg
ctagcgcaagcgcccttaaagctgggactggccattaagccccaagcgccaacccaacct
tacgcgctgaatgtcaaccatcccctgctgcagctaaaagccaatggcagcttaaaaggc
cgcacccttcaagcaaccatggccctgcctgccctcgccccgttagcggccatcgcccac
caggcgctttcaggcagcctgacggctaacctggcagctgcagccccccctagcggcgtg
atgaaggcggcccttgacggcacgctgcacctcaccccaccagggaaagcggctttgcgc
ccagcggctgcccaccacaagggcaaaaggaccaccaccccccagcgccgcccacgccgc
catggcgccgttccagcgcccagggctaccagccaggccagcgcgctccaaagtcagctc
tggggcctgctgggggcggagagccacttcagcctcaaagcatccaaggacaaaacgcgc
accacccttgaaacactcacgcttaaagggagcgccatcaaccttactagccaaggcagc
ttgaccgaatctgccacacccctggcagcctctcttaaaaccagcacgccccaaggcaaa
gggcacaaagcccccccgcccttgctcaaagcggcagccaccctcattttgccagacctt
gggcgcgccgccccccaactggaaggccacagcaccatcaggctgcaggcctcagggcca
ttggatgactttgctgcccagctggggatggatggtgctttgggtgcccatgcagggcgt
gttcacttagcacccggccccttggcattgcaggtgactgcaagccacctgcccacagcg
ccccaaattgcccttcacctcaacggtacgctcgaccatacccccttgctggctgaagcc
cagttcagccgtggcaaatcaggcgacatggccgccactatccagcgcctttcctggaag
gccctaaacgggcaaggcaagctcaccctggcggctggtcacaaagtgccgctgggacgt
tttgacctgaccatgggcaaccttgacttagtgcaggcactgacaggcatgacgtcacgc
gggcatgtggcccttcacctcaacacgactgacgaccgcacgccaccgccacttggcaca
cgccaaaccctgcatgtggcgctggacggtgccgcccaggtggggccatggggcctaggc
agcctggcgctgaacggtagcgttgcgcagctgccagacgcccccaccattatgctgaac
gcccaactgcgccatgtggccgccatgggggtgaggggggacatggctttgcgtgcccag
gggccgctttcagccttaatgttccaaagcggcgggcagttccagcatgtgccgctcaat
ggcgctgccgctgcgcgccttaaagggcctgcaccccaaacggtggctgccctatgcggc
gttaacctggcaggtcttggcgggctggaaccccctgcccaaagcagccaaggcaaagct
ctttacggcccagccagctttgacgtggcggggaccttggccctgcctttggggggcaag
gcagcccagaaaaccgccctcaaagcgccagcagccaagggtactgcaggggggggtgca
ttggcgctgcaacgcctgaagattgacgtggcaggcgaccatgtgcgcttgcgcaaccca
gcgcgcatcacttggggggcacgcacagcagtggaggggctgaacctagagctggcccct
cccaagggcgcgccagctttgttgggggtggctggtaccatcaagcctgatttggcgctt
gatgtgggtctacgcgacctcactcccgccctggccaaccccttcctgccaagcttgcgc
gcgcaagggcggctcaacggccatgcccatttaacaggcacgcttgaggccccttcaggc
agtgtggtgcttgatggcggtggcctgcggctgctcagcgccagcacggaagccatgccg
gccatcgccctggcggcacatgctgacctcaaggcggggcgggctgttttcaaagcccac
gtccaagctggccccaaagctgaggtgacggcccaaggccaagccagcgtgaaaggggat
ggtcccctggatgcccgcttgacgggccatgccgacctgggcctggccaacgccatcctg
ggggcttcgggcatggcggccgctggtatgctgaacctggacgtgaccgcacgcggcacc
acccagcacccttccctgggggggcaggtcacgctgcgccatggttcattcaaccagtac
gcgctgggcgttgaccttacggccatcaccgctgacatcctgctgcaggacaaaaacgtg
gtcatcaagggtgtgaccatcaaagctggccgtggctccatggggctgcatgggcaggtg
ggcgttctggaacccgccatgccgcttgacatgtggtttgtgatgaacaacgcccagccc
ctccacagtgacctgctgaccatcacgctggatgggaaaatccacatcttcgggcaggcg
cgcaccttgctgaatgtggatggcactgtcaccatccccacagggacggtcaacattccc
tcctccatgccagcttcggtgccgcagattgctatcgtcaagcctggccttgccccaacg
ccgcctgcgccgccagctgtcacagtgaacttgaatgtcaatgtcgtcagccctgggcag
ttcttcgtgcgcggcgatgggctctacgctgtgatggcaggcaagctccacgctggcggc
accgctaatgcccctgtgctgcaaggcggcttcgcgctgcagcaaggcacattcaacctg
gctggcgtcaatctgaacttcagcaagggggagatctcctttgggggcacaggggtggcg
cacaggcttgacccaacgctggatttccgcgctgaccgcaacgtggaaggcaccctggcc
acgctgagcgtgacgggttacgccagcagccccaaaatcaagttctactccaccccgcca
tggccccaggacgaggtgctttccatgttgttgttcggcagcatgaaaagcagcctttca
ccagcccagatggcgtcactagggttggcgctggtgcagattggcggcggcagtgccttt
gatcccctcaacgcgctgcgccaagtgctggggctggaccagctcaatatcggtggcggc
acaggggtggacaatggtggcgccgtgattgaggccggcaaatatgtggcccctggcatt
ttcgtaggggcgcgccaaggcctctcaggcggtggtgggtcgcaggctgaaatcaagatc
gacctcaccaagcacttggtcgccagcacaacgcttggcacgggtgggcaggtgaatggc
tttaccacccctgagaacgaccctggcaccagcggcagcctctcttacggaacagattac
tga
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