Formicincola oecophyllae: E3E12_01005
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Entry
E3E12_01005 CDS
T06093
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
swf
Formicincola oecophyllae
Pathway
swf00470
D-Amino acid metabolism
swf00550
Peptidoglycan biosynthesis
swf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
swf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
E3E12_01005 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
E3E12_01005 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
swf01011
]
E3E12_01005 (murD)
Enzymes [BR:
swf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
E3E12_01005 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
swf01011
]
Precursor biosynthesis
Amino acid ligase
E3E12_01005 (murD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
2-Hacid_dh_C
MurD-like_N
Motif
Other DBs
NCBI-ProteinID:
QDH13008
UniProt:
A0A4Y6U8W6
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Position
235719..237191
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AA seq
490 aa
AA seq
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MTAEHPALATGAFPENLLAGQRFAVLGLGANGRASAAALLAMGAEVVAWDDSLEEGEAQG
RSEKAAQALPAHPHLRVAPLAEGELAGCGALIMSPGIPHHLPAPHKTALLARKLGVPLLS
DAEMLYRAVRAAGSKARFVAVTGTNGKSTTTALAAHLLAEGGLPVAAGGNLGPAALALPL
LPDKGVYVIEMSSYMLERLESFKADVAIMLNLTPDHLDRHGDMAGYEAAKFHVVDNMDRT
GLVLAGENAPEAPWVARLAERLGQEGQPPRFLSAPTLHPPLPGEAPMLPGLHNAQNIWAA
QQAAGFLGVKPQDQAKGVRGFTGLAHRLKLIKDFVGEGPHGPANVRFVDDSKGTNAEATA
HALKAFPRVMWIAGGMAKAGGIEALLPLMGHVGHAFLIGRDAPLFAQTLEKAGVPHTQCG
TLERAVPLATAQALAEGGGVVLLSPATASFDQFRSYVHRGERFGQIVGETTARQQGRNKP
HQSTAKGGGR
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgaacacccagcccttgccacaggggctttccctgaaaacctcctggctggg
cagcgcttcgctgtcttggggctgggggccaatggccgcgccagcgccgctgcccttctg
gccatgggggctgaagtggtggcgtgggatgattcacttgaggaaggggaagcccagggc
aggtctgaaaaagcggcccaggctctgccagcacacccgcatttacgcgtggccccgctg
gctgagggggaactagctggctgcggcgcgctcatcatgtcgcccggcattccccaccac
ttgcccgccccccacaaaacagcccttttggcccgcaagctaggggtgcccctgctctct
gacgctgaaatgctgtaccgcgctgtgcgcgctgctggttccaaagcgcgctttgtggct
gtgacgggcacgaacggcaaatccaccaccacagcgctggctgcccaccttttggctgaa
ggcggcttgccggtggcggcggggggcaaccttgggccggcggcgctggctttgccattg
ctgccagacaagggcgtctacgtcattgagatgtcatcctacatgctggagcgcctggaa
agcttcaaggcagacgtggccatcatgctcaacctgacgccagaccacctagaccgtcat
ggcgacatggcaggctatgaagcagccaagttccatgtcgtggacaatatggacagaacg
ggccttgtcttggcaggcgaaaacgcacctgaagccccctgggtagccaggctggcggaa
cggctggggcaggaggggcagccaccgcgtttcctgagcgcacctaccctccacccccct
ttgccgggggaggcaccgatgctgccaggcctgcacaacgcccagaacatctgggcagca
cagcaagcggcgggtttcctgggggtaaagccccaagaccaggccaagggtgtgcggggg
ttcacggggcttgcgcaccgcctcaagcttatcaaagactttgtgggggaaggcccccac
ggccctgccaacgtccgctttgttgatgacagcaaaggcaccaacgctgaagccaccgcc
catgccctcaaagctttcccacgcgtgatgtggattgctggcggcatggccaaggcgggg
ggcatagaagcgctgctccccctcatggggcatgttgggcacgcgttcctgattgggcgg
gacgcccccttgttcgcccaaacgctggaaaaggcgggcgtgcctcacacccagtgcgga
accctggaacgcgctgtgcccctggccacggcccaggccctggcggaaggcggtggggtt
gtgttgctttcaccagccactgccagcttcgaccagtttagaagctacgttcacagaggg
gagcgctttggccagattgtgggtgaaaccaccgctcgccaacaagggcggaacaaaccc
caccaaagcacagcaaagggcggagggcgttga
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