Formicincola oecophyllae: E3E12_01420
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Entry
E3E12_01420 CDS
T06093
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
swf
Formicincola oecophyllae
Pathway
swf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
swf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
E3E12_01420 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
swf01007
]
E3E12_01420 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
swf03016
]
E3E12_01420 (trpS)
Enzymes [BR:
swf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
E3E12_01420 (trpS)
Amino acid related enzymes [BR:
swf01007
]
Aminoacyl-tRNA synthetase
Class I (G)
E3E12_01420 (trpS)
Transfer RNA biogenesis [BR:
swf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
E3E12_01420 (trpS)
Prokaryotic type
E3E12_01420 (trpS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
QDH13076
UniProt:
A0A4Y6U9E2
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All DBs
Position
325684..326682
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AA seq
332 aa
AA seq
DB search
MTEPARVFSGIQPTGIPHLGNWLGALRNWGALQASHECLFCLVDMHAITMPWTPAALRRN
TLESAACLLASGIEPGRLYVQSAVSAHARMGWLFDCVVRLGWLNRMTQFKDKAGKNRENH
SAGLYIYPALMAADILATGATLVPVGDDQRQHIELTNDIAQKFNHDMGVEFFKPVEALIP
PQAARVMSLRDGGKKMSKSDPSAQSRILLTDSADEIAQKIRRAKTDPEPLPAEPAGLADR
PEARNLVGIYAAVADSTPDNVLAAFAGKGFGDFKKALADLLVAKLAPISAETSRLLQDEG
HVRAVLRQGAEQARTITDPITDRAEGLVGFLR
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacagagccagcgcgcgttttctcaggcatccagcccacaggcattccccatttgggc
aattggcttggcgcgctgcgcaactggggcgcccttcaggccagccatgaatgcctgttc
tgcctggtggacatgcacgccatcaccatgccatggacaccggccgcactgcgccgcaac
acgttggaaagcgctgcctgcctgctggccagcggcattgagccagggcgcctttatgtg
cagtccgccgtgagcgcccatgcgcgcatggggtggctttttgactgcgttgtgcgcctg
ggctggctcaaccggatgacgcagttcaaggacaaagctggcaaaaaccgcgagaaccat
tcggcggggctttacatctacccagccttgatggctgctgacatcctggcgacaggcgcc
actctggtgccagtgggggacgaccagcgccaacatattgaactgaccaacgacatagcc
cagaagttcaaccatgacatgggggtagagttcttcaaaccagtggaggccctcatcccc
ccccaggcagcacgcgtgatgagtttgcgtgacgggggcaagaaaatgtcaaaatccgat
ccttcagcgcaaagccgcatcctgctaacagacagcgctgatgaaatcgcgcagaaaatc
cgccgcgccaaaactgacccagagcccctccccgctgagccagccggactggctgaccgg
ccagaggcgcgcaacctggtggggatttacgctgctgttgctgacagtacgccagacaac
gtgctggcggcgttcgctggcaagggatttggtgatttcaaaaaggccttggctgatctc
ttggtggcgaagctagcccccatcagcgctgaaaccagccgcctgctgcaggatgagggg
cacgtgcgcgccgtattgcgccaaggcgctgaacaagcgcgcaccatcaccgaccccata
acggaccgtgctgagggactggtgggtttcctgcgctga
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