Formicincola oecophyllae: E3E12_01440
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Entry
E3E12_01440 CDS
T06093
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
swf
Formicincola oecophyllae
Pathway
swf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
swf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
E3E12_01440
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
swf01007
]
E3E12_01440
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
swf03016
]
E3E12_01440
Enzymes [BR:
swf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
E3E12_01440
Amino acid related enzymes [BR:
swf01007
]
Aminoacyl-tRNA synthetase
Class II (U)
E3E12_01440
Transfer RNA biogenesis [BR:
swf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
E3E12_01440
Prokaryotic type
E3E12_01440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
tRNA_bind
FDX-ACB
B5
Motif
Other DBs
NCBI-ProteinID:
QDH13080
UniProt:
A0A4Y6U7V3
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All DBs
Position
complement(330625..333213)
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AA seq
862 aa
AA seq
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MKFPLSWLYAHLGPDASGHVPELPAITAALDRIGLEVEGVSSPADDLKGFRIGHILSAEP
HPDADRLQVCQVDVGEGAPVQVVCGAPNARPGLKVIFAPPGTYVPGADITIKAGAIRGQK
SGGMMCSLRELGLGTAHDGIAELPAQAPTGADYATWAELDDPVLDIAITPDRGDALGVRG
VARDLAAAGCGQLRPLPEAEPQASTPFTPDDHAPLTWVKNHDGVLVAAGRVVRGVKNGPS
PEWLKKRLQAAGIQPKNALVDVTNYIMLAFNRPLHVFDAAKVTGSTLELRAAQAGEVFTA
LDGVERHLKGGEVVIADGAGVQSLAGIMGGATTGVDEGTTDVFIESAVFDPVAVALAGRL
HSLESDARYRFERAIDPASALEGLEAATALITQLSGGAPGKVVTVGKVAPPTRTATMHFV
ALEELGGVALTPDEVVSALERLGFNVLERDGQAVKVAVPSWRPHIAPGVTVSNPLAQAPS
LPEEARQQAASSVEGVEAEAQLVAEVLRLRGLDDIAPKPLPPLPADRTPKVPAAFARDGR
LRQAMAGRGMVEAISFSFTSSGDAELFGGPVHSGHRLLNPIASDLDVLRPTPLPNLLRAL
SRNLARSLGKEGDAALFEVGPAFTAQGVSTTLAGVRGGSTARCPGQRARAFGWRDSKADL
MAALAALGIDEGTLTIVPLHIMPEGERPPHYHPGRSGQVRRGPKQVLGTFGELHPTTAKA
LGLDGKGMEATLALFELDAEAAQPAKATGKKRKSKQPSPPPLSPFQPVRRDFAFITPATV
PVQDILAAARKALRALPVKGVKGTARLFDLFEGAGLGAGERSTGIEVILVPERETLQDEA
IELMANHVEQVVAQSTGATLRR
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttcccctttcctggctttacgcccatttgggccctgacgcttcaggccatgtg
ccggaactgcctgccatcacagcagccctggaccgcatcggcctggaggtggagggcgtc
tcctccccagctgacgacctcaaggggttccgcattgggcacatcctttcagctgaaccc
cacccagacgctgaccgcctgcaggtctgccaagtggatgtgggcgagggagcgcccgtc
caagtggtgtgtggggcgcccaatgcacgtcctggcctcaaagtgattttcgccccccct
ggcacgtatgtccctggggcggacatcaccatcaaggcaggggccatccgtggccagaaa
tcagggggcatgatgtgttccctgcgtgagctggggctgggcactgcccatgacggcatc
gctgagctaccagcgcaggctcccacaggggcagactatgccacatgggcggagctggac
gaccctgttctggatattgccatcacaccagaccgcggtgacgccctaggcgtgcgtggg
gtggcgcgtgaccttgccgctgcaggctgtggccagctgcgccctctgcctgaggccgag
ccgcaggccagcacccccttcacgcctgatgatcacgcgccactgacatgggtgaagaac
catgatggcgtcttggtggcggcagggcgcgtggtgcgcggcgtcaaaaacggccccagc
cctgaatggctcaaaaagcgccttcaggcggcaggcattcagcccaagaacgcccttgtg
gacgtaaccaactatatcatgctggctttcaataggccgctgcatgtgtttgacgcggct
aaagtcacgggcagtacgcttgaactgcgcgctgcccaggctggggaggtcttcacagcg
cttgatggcgtggaacgccaccttaagggtggtgaggtggtcattgctgatggggcaggc
gtgcagtcgctggcgggcatcatgggaggtgcgaccacaggggttgatgagggcacaacg
gatgttttcattgaatcagctgtgttcgaccctgtggctgtggcgctagctgggcgccta
cacagccttgagagtgatgcgcgctaccgatttgagcgtgccatcgaccccgcctctgcc
cttgaggggctggaggcggcgactgccctcatcacgcagctaagtggtggcgcccctggt
aaagtggtgacggttgggaaggttgcgccaccaacacgcaccgccaccatgcactttgtt
gccctggaggagctggggggtgtcgcccttacccctgatgaggtcgtcagcgcgcttgag
aggctggggttcaacgtgctggagcgtgatgggcaggccgtcaaggtggctgtgccctca
tggcgcccccacatcgcgccaggcgtgacagtcagcaaccctttggcgcaggcaccaagc
ctgcctgaagaagcgcgccagcaggctgcttcctcagtggagggggttgaggctgaagcg
cagctggtggcagaggttctgcgcctgaggggcttagacgacatcgcccccaaacccctc
ccgccactgcctgctgaccgcacccccaaggtgccagcggcctttgcccgtgatgggcgc
ttgcgacaagccatggctgggcggggcatggtggaggccatcagcttctccttcacctcc
agtggggatgctgaattgtttggtggccctgtccattcagggcacagattgctcaacccc
atcgccagcgatttggatgtgctgcgtcccaccccattgcccaacctgttgcgcgcgctc
agccgcaacctggcgcgcagcttgggcaaggagggagacgccgctttgtttgaagttggg
ccagccttcactgcgcagggggttagcaccacgcttgcaggcgtgcgcggcggcagcacg
gcgcgctgccctgggcaacgtgcccgcgcctttggttggcgcgacagcaaagctgacctg
atggcagccctggcagcgcttggcattgatgagggtaccctcaccattgtgccgcttcac
atcatgcctgaaggggagcgcccccctcattaccaccctggccgctctggccaggtgcgg
cgtggccccaagcaagttctgggtacttttggggaacttcatcccaccaccgctaaggcc
ttgggtctggacggcaaggggatggaggccaccttggctttgtttgaactggacgccgaa
gcggcccagcccgccaaggccacgggcaaaaagcgcaaaagcaagcaaccttcccccccg
cccctttcccccttccagcctgtgcggcgtgattttgccttcatcactccagccacagtt
cccgtccaggacattttggccgctgcccgcaaagctttgcgcgccttgcctgtgaagggc
gttaaaggcactgcgcgtctgtttgacctttttgaaggcgcaggccttggcgcgggcgaa
cgctccacaggcattgaagttattctggtgccggagcgtgaaacgctgcaggatgaggct
attgagctcatggccaaccatgtggaacaagtggtggcccaaagcacgggtgccacattg
cgccgctga
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