Formicincola oecophyllae: E3E12_01700
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Entry
E3E12_01700 CDS
T06093
Name
(GenBank) ABC transporter ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
swf
Formicincola oecophyllae
Pathway
swf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
swf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
E3E12_01700
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swf02000
]
E3E12_01700
Enzymes [BR:
swf01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
E3E12_01700
Transporters [BR:
swf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
E3E12_01700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_22
AAA_29
RsgA_GTPase
AAA_16
AAA_25
ABC_ATPase
SbcC_Walker_B
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
QDH14289
UniProt:
A0A4Y6U9X9
LinkDB
All DBs
Position
complement(389536..391185)
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AA seq
549 aa
AA seq
DB search
MTLAWRIFREEVTPHSCLLGAMVLLTMLMGSLTAAYPVVIKKAIDMFTAHDRRILYQVPL
LVMGVTGAKALAQYGQNVAVQTMVMKVMRNLQKRMFAHTLAADVAWLEREAPAQWSARFT
SDALAIREALTRSVNALGDVITLAGLVVAMVWMDWELSLAAIVLYPLASVPVQRLGRAVR
RSASGAQEQMGQTAALLTESFALARQVRTYGLEAHEEARAGRAFARLHDTFLRIACNRAR
LDPMLEVIGGAAIAFVLGFAGWRAATGGATLGGFTAFVAALFASSRPLRSLGSLNTALQE
GMGGMARVFAVIDEPPAIRQHPGAKALPPGQGTLRFEHVCHSYDDGRSALEDVSFEIPAG
TMVAFAGPSGAGKSTLLSLVPRLHDPSSGRIMLDGTDISTVNLPSLRASMAYVCQETALF
DMSVRDNILLGRPTATLSEFKAACAAAAIDFLDDLPGGADFRVGPDGQRLSGGQAQRVAL
ARALVRQPRLLLLDEATSALDAATEARVLAAITAMRAGRTTLLVAHRHAAIKAAQRVIHL
EQGKVVEPS
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgacgcttgcatggcgcattttccgtgaggaagtgacgccccattcgtgtctgttgggg
gccatggtgctgctgactatgctgatgggcagcctgacggcggcttaccctgtagtcatc
aagaaggccattgacatgttcaccgcccacgacaggcgcattctctaccaggtgccgttg
ctggtcatgggggtgacaggcgccaaggcgcttgcgcagtacgggcagaatgtcgctgtt
cagaccatggtcatgaaggtgatgagaaacctgcagaaacgcatgttcgcccacacttta
gccgctgacgtagcgtggctggaacgtgaggcgccagcgcagtggagcgcgcgtttcaca
tcagatgccctggccatcagggaagcgctgacccgttcagtcaacgcgttgggtgacgtc
atcaccttggctggccttgtcgtggccatggtgtggatggactgggagctgagcctggcc
gccattgtgctgtaccccctcgcttctgtcccggtgcagcgcctggggcgtgcggtgcgg
cgtagcgcttccggcgcgcaggagcagatgggccagacagcagcccttctgacggagagc
ttcgccctagcgcggcaagtgcgcacctatggtctggaggcccacgaggaagccagggct
ggcagggctttcgccaggctccatgacacgttcctgcgcattgcgtgcaaccgcgccagg
ctggaccctatgttggaggtcatcggtggcgcggccatcgcttttgtgctgggtttcgca
ggctggcgggcggccacaggcggggcgacactggggggatttacggcgtttgtagcggcc
ttgtttgcctcatcgcgccctttgcggtctttggggtcgctcaacacggctttgcaggaa
ggaatggggggcatggcgcgcgtgttcgctgttattgatgagccacccgccatccgccag
caccctggcgccaaggccctgccgcctgggcagggtacgttgcgtttcgagcatgtatgt
cacagctatgatgatggccgcagtgcgctggaggatgtcagttttgaaatcccagcaggc
accatggtggctttcgcagggccttccggcgctggcaaatccaccttgctttccctggtc
ccgcgccttcacgacccctcatcagggcgcatcatgctggatggcactgacatcagcaca
gtgaatctgccgtcactgcgggcatccatggcttatgtgtgccaggaaacggcgcttttc
gacatgagcgtgcgtgacaacatccttttggggcgcccaacagccactttaagtgaattc
aaagctgcctgcgcagcagcggcgattgatttcctggatgacctgccaggtggggctgat
ttccgtgtggggcctgatggccagcgcctttcaggggggcaggcccagcgtgtggccttg
gcgcgcgcccttgtcaggcagccacgcctgctgctgctggatgaggcgacttcagccctt
gacgctgctacggaagcgcgcgttctggcggccatcactgcgatgcgcgccggcaggaca
acccttttggtggcgcaccgccacgccgccatcaaggcagcgcagcgcgttatccacctg
gagcaaggcaaggtggtggagccttcttga
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