Formicincola oecophyllae: E3E12_01795
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Entry
E3E12_01795 CDS
T06093
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
swf
Formicincola oecophyllae
Pathway
swf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
swf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E3E12_01795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
swf03021
]
E3E12_01795
03400 DNA repair and recombination proteins [BR:
swf03400
]
E3E12_01795
Enzymes [BR:
swf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E3E12_01795
Transcription machinery [BR:
swf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E3E12_01795
DNA repair and recombination proteins [BR:
swf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E3E12_01795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
Motif
Other DBs
NCBI-ProteinID:
QDH14293
UniProt:
A0A4Y6UA07
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All DBs
Position
complement(418114..419133)
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AA seq
339 aa
AA seq
DB search
MALQKNWQSLIRPEKLAVEPGSNPAQKATVVAEPLERGFGLTLGNALRRVLLSSLQGAAV
TAIQIDGVLHEFQAVSGVREDVTDIVLNVKQLALRMHGEGPKRMSLSATGPGEVKASQIQ
TGPDIEIMNPDLVICTLDDDVKFNMEFIVDAGKGYVPAAENRPEEAPIGLIPVDAIYSPV
KRVSYKVEPTRVGQVTNYDKLLLNVETNGVIAPEDAVAVAARILQDQLQLFINFDEPRQV
QHEEPQDDLPFSRHLLRKVDELELSVRSANCLKNDNIVYIGDLVQKTEQEMLRTPNFGRK
SLNEIKEVLTGMGLSLGMNVPEWPPESIEDLTRRLDENF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
ttggctctccagaaaaactggcagtccctcattaggcccgagaagcttgcggttgaacct
ggctccaaccctgcccagaaagcaacggttgtggcagaaccccttgagcgtggttttggt
ctgaccctgggcaatgccctgcgccgtgttttgctgtcatcattacaaggggcagctgtt
accgccattcagattgatggcgttcttcacgagttccaggctgtttcaggtgtgcgtgag
gatgtgactgacattgtcctcaacgttaagcaactggctttgcgcatgcatggcgaaggc
cccaagcgcatgtccctcagcgctactgggcctggggaagtgaaagcttctcagattcaa
actggccctgacatcgagatcatgaatcctgaccttgtcatctgcactttggatgatgac
gtcaaattcaacatggaattcatcgttgacgctggcaagggctatgtgcctgccgctgag
aaccgcccagaagaggcgcccattggcttgattccagtggatgcgatctactctcccgtc
aagcgcgtttcctacaaggtggagccaacgcgtgttggacaggtgaccaactacgacaag
ctcctcctcaatgtggagaccaatggggtcatcgccccagaggatgctgtggctgtggcc
gcgcgtattcttcaagaccagctgcagctgttcatcaactttgatgagccacgccaggtg
cagcatgaggagccgcaggacgacctgcccttcagccgtcatttgctgcgcaaggtggat
gagcttgagctttccgtccgtagcgctaactgcttgaaaaacgacaacattgtctacatt
ggcgacttggttcagaagactgagcaggaaatgctgcgcacaccgaacttcggtcgcaag
tcgttgaacgagatcaaagaagtgctgacaggtatgggtctttccctgggcatgaatgtg
ccagagtggccgcctgagagcattgaggacctcacacgtcgtctcgatgagaatttctga
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