Formicincola oecophyllae: E3E12_02965
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Entry
E3E12_02965 CDS
T06093
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
swf
Formicincola oecophyllae
Pathway
swf00550
Peptidoglycan biosynthesis
swf01100
Metabolic pathways
swf01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
swf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
E3E12_02965
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E3E12_02965
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
swf01003
]
E3E12_02965
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
swf01011
]
E3E12_02965
Enzymes [BR:
swf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
E3E12_02965
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
E3E12_02965
Glycosyltransferases [BR:
swf01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
E3E12_02965
Peptidoglycan biosynthesis and degradation proteins [BR:
swf01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
E3E12_02965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
QDH13333
UniProt:
A0A4Y6U7F2
LinkDB
All DBs
Position
682732..685329
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AA seq
865 aa
AA seq
DB search
MSAPAPRRPDHPPGTSPRARRVRLALATVLSLGVLGTGAAALAGWVGYEGLEATLPDVTT
LQHYHPPTVSRVYANNDVLMAELAKERRIYVPIAAIPPLVRNAFIAAEDQHFYTHHGIDP
VAIMRAGLTDLANRHGKRPLGASTITQQVAKGMLLNDNSLSLARKAKEALLALRIEQALP
KNRILEIYLDGIYLGNGTYGVQAAALGYFNKPLDQLDVAEAAMLAAMPKSPAHYNPFYHP
EAAKERRDWVIDRMEETGAITPAQAEAAKAEPLPTTGHGARRGPLPDSEWFSEDVRRDLI
EHFGAANALQGGLDVHTSMEPALQHIVTRALRQGLVQYDRSNNAWRGSLGQLDNAEAWPE
MLADKRYAAAHTPVTMPDEWRLAAVITSPAGPHRPARVGWLEDGAPRTGLLRPGDAHWAR
FHPLRPGDLVMIEPQKDGEAALQQLPQVEGAAVVMEARTGRVLAMTGGWSFRASQFNRVT
QALRQPGSSFKPLIYLEAMDEGISPSQKFQDGPISFGDWHPQNYEHNNWGPTTLHDALRE
SRNLVTIRLAAHLGMKKVIDIAERSGMVNNMPPYLPAALGAVETTVLKEAAAYAAMANGG
HRITPSLVDYIEGPDGSIISRATPIVLGQAPTTQDNMEGLPTLENTTPQLASPQAAYQIA
TMMKDVIVHGTGRIAGAGINQPIGGKTGTSQDYRDAWFAGYSPEIVTVVWVGYDTPRSLG
KRETGGRVAGPIWNTIMKAALAERRPLDFAQPEGVHLFHYDTGRIPAVDAFLDDQYPGAS
GSLAVPHEKVAIEAGEGGQLVPGSEEDMDDAPSTSASAEGAPNFPSLAPNDAGANSPYPT
SIPESRSTTAPEEEQDANIGVGGLY
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaccagcaccacgcaggccagaccacccccccggcaccagcccgcgcgcccgc
cgcgtgcgcctagcgctggccaccgtgctgagcctgggcgtgctggggacgggcgccgcc
gctttggctggctgggtgggttatgagggtctggaggccacactgcctgacgtcaccacc
ctgcagcattaccacccccccaccgtcagccgggtttacgccaacaatgacgtgctcatg
gcggaactggccaaggaacggcgcatctacgtgcccatagcggccatcccgcccctggtg
cgcaacgcattcatcgcggctgaggatcagcatttctacacccaccatggcatcgacccc
gtggccatcatgcgcgctggcctgacggacctcgctaaccgccacggcaagcgcccgctt
ggcgcctccaccatcacgcagcaagtggccaaggggatgctgctcaacgacaactctcta
agcttggcgcgcaaagccaaggaggccctgctggcgctgcgcattgagcaggcgctgccc
aagaaccgcatcttggagatctacctggacggcatctacttgggcaacggcacctacggt
gtccaggcggcggcgctgggctacttcaacaagcccctggaccagctggacgtggctgag
gccgccatgctggccgccatgcccaaatcgccagcgcactacaaccccttctaccaccct
gaagccgccaaggagcgccgcgactgggtgattgaccgcatggaggagacgggcgctatt
accccagcgcaggcggaagccgccaaggcggagccactgcccaccaccggccatggcgcc
cgcaggggcccgctgcctgattcagagtggttctccgaggatgtccgccgcgacttgatt
gagcatttcggtgcagccaacgccctgcaagggggcctggacgtccacaccagcatggag
ccggccctgcagcacattgtcacgcgcgccctgcgccaaggccttgtgcagtatgaccgc
agcaacaatgcctggcgcggcagtctggggcagctagacaacgctgaggcctggccggaa
atgctggccgacaagcgctacgccgccgcccacacgcctgtcaccatgcctgatgaatgg
cgcctggccgccgtcatcaccagccctgccggcccccaccgccccgcccgcgtgggctgg
ctggaggatggcgccccccgcacagggctgctgcgccctggcgatgcccactgggcgcgc
ttccatcccctgcgccctggcgacctggtgatgattgagccccagaaggatggcgaagct
gccctgcagcaacttccccaggtggagggcgctgccgttgtgatggaggcacgcacgggg
cgcgtcctggccatgacgggtggctggtccttcagggcaagccagttcaaccgcgttacc
caggcgctgcgccagcctggctcctccttcaagccgctgatctacctagaggccatggac
gagggcatctccccctcccagaagttccaggatggccccatttccttcggcgattggcac
ccccagaactacgaacacaacaactggggccccaccacactgcatgacgccctgcgcgaa
agccgcaacctggtgaccatccgcctggcggcgcaccttggcatgaagaaggtcatcgac
atcgccgagcgttcaggcatggtcaacaacatgcccccttatctgccagctgccctgggc
gcggtggaaacgaccgtcctcaaagaggccgcggcctacgccgccatggccaatggcggc
caccgcatcacccccagccttgttgactacatcgaagggcctgacggcagcatcatctcc
cgcgccacccccatcgtccttggccaagctcccaccacgcaggacaacatggaaggcctg
cccacgctggaaaacaccacaccccagctggctagcccccaggccgcctaccaaatcgcc
actatgatgaaggacgttatcgtccatggaacggggcgcatcgcaggcgccggcatcaac
cagcccatcggcggcaaaacaggcaccagccaggattaccgcgatgcttggttcgccggc
tactcgcctgaaatcgtcacggttgtctgggtgggctatgacacgccgcgctcccttggc
aagcgcgagactggcggccgcgtggcggggcccatctggaacaccatcatgaaggccgcc
ttggcggaacgccgcccgcttgacttcgcccaacctgaaggagtgcacctgtttcattac
gacacagggcgcatcccggctgtggacgccttcctggacgaccagtacccaggcgccagc
ggctccctggctgtgccgcatgagaaggtggccatcgaagctggcgagggtgggcagctt
gtccctggctctgaggaagacatggatgacgccccctccacctcagccagcgcggagggc
gcgccgaacttcccaagcctggcccccaatgacgctggcgccaacagcccttatccaacc
tccatccctgaaagccgctccaccacagcgccagaggaagagcaagacgccaacattggt
gtgggcggcctttactaa
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