Formicincola oecophyllae: E3E12_03165
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Entry
E3E12_03165 CDS
T06093
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
swf
Formicincola oecophyllae
Brite
KEGG Orthology (KO) [BR:
swf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
swf03032
]
E3E12_03165 (gyrA)
03400 DNA repair and recombination proteins [BR:
swf03400
]
E3E12_03165 (gyrA)
Enzymes [BR:
swf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
E3E12_03165 (gyrA)
DNA replication proteins [BR:
swf03032
]
Prokaryotic type
DNA Topoisomerases
E3E12_03165 (gyrA)
DNA repair and recombination proteins [BR:
swf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E3E12_03165 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
TPD52
Motif
Other DBs
NCBI-ProteinID:
QDH14333
UniProt:
A0A4Y6UA40
LinkDB
All DBs
Position
complement(725340..728222)
Genome browser
AA seq
960 aa
AA seq
DB search
MDAPPPAPPASGPGAGWSDIEPINISAEMRSSYLAYAMSVIVSRALPDVRDGLKPVHRRI
LYAMRESGFTADKPYRKAARAVGDVMGKYHPHGDSSIYDALVRMAQNWSMRVMLVDGQGN
FGSIDGDSPAAMRYTEARLAKASSWLLDDIDRETVPFQPNYDESEMEPEVLPAAFPNLLV
NGSAGIAVGMATNIPPHNPAEVIDATLALLEDPDITLEGLMEYLPAPDFPTGGLIMGRSG
VKQAYETGRGSIPVRARAHIEEIRKDRQAIIITEVPYQVNKASLLEKIADLVRAKDIEGI
ADIRDESDRTGMRAVIELKRDATPDVVLNQLYRFTQMQTTFPVNMVALEEGRPRVMGLRD
VLEAFLRFREEVILNRSRYELRRARERAHLLVGFVLAVANIDAVIALIRAEPDSASARAA
LMARDFPAADVEPLLALIHHEGNKVEGGRVRLTEAQARGILELRLQRLTGMERERIQSEL
AEVAERIKALLEVISSRPRRLEVLRDELHAVRAAMATPRLTEISASLGNETDESLIEPDQ
MVVTITRDGFIKRTSLATFRAQNRGGRGRTAAGRRGDDVVVRSFNAHTHQWVLFFTSGGK
AYRMKVWHLPEAAPTSKGRALVNMLPDVGDDTITAVLPLPQDEGEWDDLHLVFATASGHV
RRNRLADFSNIRANGLIAMKLEDGDHLIGVETCRVGQDVFLATRNARAIRFQITDQAVRV
FAGRNGKGVRGIKLLDDDKVVSLCVLEHVEATPEERASYLRLANQLGINGRSTADNALAE
ESDDAGLDEGSAAEADGDDVLAAGLEGSPLDEERFEALRAAEQTLLTVTDAGFGRRASGY
AYGLKNRAGKGLINMKFNSRRGREVVGTLKVESGADVMMVTDTGRLIRLPVDQVRVMSRT
AGGVTLFRVEPDEHIISVFLVANDDDAEAALEEVDAEIIETVDATAFTDNENGQGEAEPS
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaccaccccccgccccgcctgcaagcggcccaggcgctggttggagcgacatt
gagcccattaacatctccgcagagatgcgctcctcctacctggcctatgcgatgtctgtt
atcgtatcgcgtgccttgcctgatgtgcgcgatggcctcaagcctgttcaccggcgcatc
ctctacgccatgcgcgaaagtggctttacagccgacaagccttaccgaaaagcggcgcgc
gctgtgggtgacgtgatgggtaaataccatccccacggcgacagctccatttacgatgcc
cttgtccgcatggcgcaaaactggtccatgcgcgtcatgctggtggatggtcagggcaat
ttcggttccatcgatggcgacagcccagccgccatgcgctacacggaagcccgcctggcc
aaggcttcctcctggctgcttgacgacatcgaccgcgagacagtccctttccaacccaac
tatgatgaaagcgagatggagcctgaagtgctcccagccgctttccccaacctgctggtc
aatggctcagcaggcatcgctgtgggcatggcgaccaacatccctccccacaaccccgct
gaggtgattgatgccacgctggccttgttggaggaccccgacatcacccttgaagggctg
atggaatatttgccagcccctgacttccccacagggggtcttatcatggggcgttctggg
gttaagcaggcttatgaaacggggcgtggctccatccccgttcgcgcgcgtgcccatatt
gaggagatccgcaaggaccgccaggccattatcatcaccgaagtcccctaccaggtgaac
aaggccagcttgctggagaagatcgctgacctggtgcgtgccaaggacattgagggcatc
gccgacatccgtgatgaaagcgaccgcacaggcatgcgcgccgtcattgagcttaagcgt
gacgccacccctgatgtggttctgaaccagctttaccgcttcacgcagatgcagacgacc
ttccctgttaacatggtggcgttggaggaggggcgcccccgcgtcatgggactgcgtgac
gttctggaggccttcttgcgcttccgcgaggaagtcatcctcaaccgttcgcgctacgag
ctgcggcgcgcgcgtgaacgcgcccaccttttggtaggctttgtcctggcagtcgcgaac
attgacgccgtcatcgccctcatcagggcagagcctgacagcgcctcagcgcgcgccgcc
ctcatggcgcgcgacttcccggcagctgacgtggagcccctgctggccctcatccaccat
gaaggcaacaaggtggagggggggcgcgtccgcctgacggaggcgcaggcacgtggtatc
ctggagctgcgcctacagcgcctcactggcatggagcgtgagcgcatccaaagcgagttg
gcagaggtggctgagcgcatcaaggccttgcttgaggtgatctcctcgcgtcccaggcgc
cttgaggtcttgcgtgacgaactccatgccgtgcgcgccgccatggccaccccccgcctg
acggagatctcagccagcctgggcaatgagaccgatgaaagcctgattgaacctgatcag
atggtagtgaccatcacccgcgatggctttattaagcgcacgtccctagccaccttcagg
gcacagaacaggggcgggcgcgggcgcacggcggctggccggcgtggtgatgatgtcgtg
gtgcgcagcttcaacgcccatacccaccaatgggtgctgttcttcacctctggcggcaag
gcctaccgcatgaaggtctggcacttgccagaagcggcgcccacctccaagggacgtgcc
ctggtcaacatgctgcctgatgtgggtgatgataccatcacggcggtgctgcccctgcca
caggatgaaggtgaatgggacgacctccacttggtgttcgccacggccagcggccatgtg
cggcgcaaccgcctggcagatttctccaacattcgcgccaatggtctcatcgccatgaag
ctggaggacggtgaccacctgatcggcgttgaaacatgccgcgtggggcaggacgtgttc
ttggccacccgcaatgcccgcgccattcgcttccaaattacggaccaggcggtgcgtgtg
ttcgctgggcgcaatggcaaaggggtgcgtggtattaagctcttggacgatgataaggtg
gtgtcgctgtgcgtacttgagcatgtggaagccacccctgaggagcgtgcttcctatctg
cgcttggctaaccagcttggcatcaacgggcgtagcacagctgacaacgccctggctgag
gagagcgacgacgcaggccttgatgaaggcagcgccgctgaagctgatggcgatgacgtt
ctggctgctggcttggagggttccccccttgacgaggagcgtttcgaggccctgcgcgct
gccgagcaaaccctgctgaccgtgacggacgcaggcttcgggcgccgtgcctcaggctat
gcctatggtttgaagaaccgcgctggcaaggggctgattaacatgaagttcaattccagg
cgcggccgtgaggtcgtgggcacgctgaaggtggaaagtggggctgacgtcatgatggtg
acggacacagggcgcctcatcaggttgcctgtggaccaggtgcgggtgatgtcacgcact
gctggtggtgtgactttgttccgggtggagcctgacgaacacatcattagcgtgttcctg
gtggctaatgatgatgacgctgaagcggcgcttgaggaagtggatgccgaaatcatcgag
accgttgacgcgactgccttcactgataacgaaaatgggcagggggaagcggagccatct
tga
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