Formicincola oecophyllae: E3E12_03215
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Entry
E3E12_03215 CDS
T06093
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
swf
Formicincola oecophyllae
Pathway
swf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
swf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E3E12_03215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
swf03400
]
E3E12_03215
Enzymes [BR:
swf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E3E12_03215
DNA repair and recombination proteins [BR:
swf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E3E12_03215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
PriA_3primeBD
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
QDH13374
UniProt:
A0A4Y6U873
LinkDB
All DBs
Position
complement(737773..740058)
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AA seq
761 aa
AA seq
DB search
MTAPSASRAAVLVPRPFPGPLDYSVQGQAPAPGTLVHVPLGRGKGREVVGCVWDTPQERS
STLAATAMGGAVAAARLKPLGSPLPGVPPLPATLRRFVDWVADYTMSPPGMVLAMAVRAP
VQTPPRQPVPGWRPVAPEKPPGLTGAAATPTRLRVWAAAGQGTAKTVPELASAAQCGVAV
VRGMINKGWLVQAEHSGAVNPTPQPDYERPTLSDDQRKAASLLVSQVDKAVFSTTLLEGV
TGSGKTEVYFEAVEQALRMGRQVLVLLPEIALTAQWGSRFEKRFGCAPLIWHSALGGRAR
TDVWMACATGQARVVVGARSALFLPFADLGLVVVDEEHEATYKQEEGVLYHGRDMAVVRA
RLAGAPCILASATPSLETRANVEKGRYGHVLLPRRHGGALMPAVKLINLTKNLPAPGQWL
SQPLRDAVSQTLDRGEQALLFLNRRGYAPLTLCRHCGYQFECPHCSAWMVEHKSHQRLTC
HHCEHSEPAPAFCPQCGESDMLAAIGPGVERIHEEARRLWPHAELLCLASDEMKSPESLR
QAIERVASGQTNLIIGTQLVAKGWHFPHLTTVGVVDADLGLNGADLRAGERTMQLLQQVA
GRAGRAERPGTVWLQSWDVRHPLMQAMAHDDMAGFLEAEKAARAPGFWPPFGRLAALVVS
APIAEQAEEMAQLVASVGPHGVPGVQILGPAPAPMAFLRGRHRQRLLLKTQRSVALQPLL
RQWLAKVAEVEKEHSAGRQAKSLSWQGDVRLTVDIDPVSFM
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgactgccccttccgccagccgtgcggctgtcctggtgccacgccccttcccaggccct
ttggattacagtgtgcagggccaggcgccagcaccaggcacattggtacatgtgccgctt
gggcgcggcaaagggcgggaagtggtgggatgtgtttgggacaccccccaagaacgctcc
tcaaccctggcggccactgccatggggggagcggtggcagcagcgcggttgaagcccctg
ggcagccccttgcctggtgtgccgcccttgccagccacactgcgccgttttgtggattgg
gtggctgattacaccatgagccccccaggcatggtgctggccatggcagttcgcgcccct
gtgcagacaccgccgcgccagccagtgccaggttggcgcccagttgcccctgaaaagccc
ccagggcttacaggggcggcggccaccccaacgcgtttgcgcgtatgggctgcggctggc
caaggcacagcgaaaaccgttccagaactggcaagcgctgcccagtgcggcgtagccgtt
gtgcgcggcatgatcaacaaaggttggctggttcaggcagaacactctggggcggtgaac
cctaccccccagccagactacgagcgccccacgctttcagatgaccaacgcaaagcggct
tcccttttggttagtcaggtggacaaggcggttttttccaccacccttttggaaggcgtg
acggggtcaggcaaaacggaggtgtactttgaagccgttgagcaggcgttgcgcatgggg
cgccaagtgctggtcctgttgccggagatcgcgttgacagcccagtggggaagccgtttt
gaaaaacgctttggatgtgcgcccctgatttggcattcggctttgggggggcgggcgcgc
accgatgtgtggatggcctgcgccacaggacaggcccgtgtggttgtgggggcgcgttca
gcccttttcctgccttttgctgatttgggccttgttgtggtggatgaggagcacgaagcc
acctacaagcaggaggaaggggtgctttaccatgggcgagacatggcggtggtgcgggcc
aggttggcgggcgcgccctgcattctggcttcagccacgccctccttggaaacgcgcgcc
aatgtggagaagggccgctatggccatgtcctgctgccaaggcgccatggtggcgccctc
atgccagcggtcaagctcatcaacctgaccaagaatttgcctgcgcctggtcaatggctc
tcacaacccttgcgcgatgccgtcagccagactttggacaggggggagcaggccctgctg
ttcctgaatcgccgcggttatgcgcccctaacgctgtgccgccactgtggttaccagttt
gaatgcccccattgctccgcctggatggtggagcacaaaagccaccagcgcctgacatgc
caccattgtgaacacagcgaacctgcaccagcgttctgcccgcaatgcggtgaaagcgac
atgttggcggccattgggccaggggtggagcgcattcatgaggaggcacgcaggctctgg
ccccatgctgaactcctgtgcctggcctcagacgagatgaaaagccctgaaagcctgcgc
caagccattgaacgcgtggcttcaggccagactaacctcatcattggaacgcagttggtg
gccaaggggtggcatttcccccaccttaccacggtgggggttgtggatgccgatttgggg
ctgaatggagctgacttgcgtgctggtgagcgcaccatgcagcttttgcagcaggtggct
gggcgcgctgggcgcgctgaacgccctggcacggtttggctgcaaagttgggatgtgcgc
caccccctcatgcaggccatggcgcatgatgatatggcaggcttcctggaagctgagaaa
gcagcccgtgcgccaggtttctggccaccttttgggcgtttggcagccttggtcgtcagc
gcccccatagcagagcaagctgaggaaatggcccaacttgtggcttcagtcgggccccat
ggggtgccaggcgtacaaatcctgggcccagcccctgcccccatggcgttcctgcgtggc
cgccaccgccagcgattgctgctgaaaacgcagcgctctgtggccttacagcccttgctg
cgtcaatggctggcgaaagtggccgaagtggaaaaggagcacagcgcagggcgccaggcc
aagtcactttcctggcagggggatgttcgcctgacagtagacatcgaccccgtctccttc
atgtga
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