Formicincola oecophyllae: E3E12_03885
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Entry
E3E12_03885 CDS
T06093
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
swf
Formicincola oecophyllae
Pathway
swf00541
Biosynthesis of various nucleotide sugars
swf01100
Metabolic pathways
swf01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
swf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
E3E12_03885 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
swf01005
]
E3E12_03885 (rfaD)
Enzymes [BR:
swf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
E3E12_03885 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
swf01005
]
Core region
E3E12_03885 (rfaD)
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Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
3Beta_HSD
Motif
Other DBs
NCBI-ProteinID:
QDH13480
UniProt:
A0A4Y6U901
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Position
complement(889936..890958)
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AA seq
340 aa
AA seq
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MILITGGAGFIGSCLQERLFAQNRQTIVADWLGGGASSALSTGQAQPGRWRNLAAHPPLE
VVAPEALSTWLERAPALRAVVHLGAISETTAKDGDLVWRTNVALPQQLWRWCARARVPFI
YASSAATYGSAVNDFRDGLEGLERLRPTSLYGWSKQAFDLWVCQALERGHPSPPQWAGLK
FFNVYGPNEYHKGAMMSVIKVKYDELAAGRPLTLFKSDDPSVADGQQKRDFIWVGDCVDV
VLWLLRNPHVCGLFNCGTGQARSYSDLARAVCQAADRPEAITYVPMPQRLQGQYQYYTQA
NMDALREAGYQAPFTPLEEGVRRYVQSYLMQAGPAGPRTL
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgatactgattactggtggtgctggattcatcggctcctgcctgcaggagaggttgttt
gcgcaaaaccgccaaaccattgttgctgactggcttggtggcggggcatccagcgctttg
agcacaggacaggcgcagcctgggcgctggcgcaacctcgctgcccacccccccctggag
gtggtggcgcctgaagctctctcaacatggctggagcgcgccccggctttgcgtgctgtt
gtgcacttgggcgccatcagcgagaccacggccaaggatggcgacctggtgtggcgcacc
aatgtggcgctgccccagcagctttggcggtggtgcgcgcgagcacgcgtgccgttcatc
tacgcttcctccgcagccacctatggcagtgctgttaatgactttagggatggtttggag
ggtttggaacggctgcgccccacgagcctttatggatggagcaagcaggcgtttgacctg
tgggtgtgccaagccctggaaaggggccatccctccccccctcagtgggctggcctgaag
tttttcaatgtctatggccccaatgaataccacaagggcgccatgatgtcggtcatcaag
gtcaagtatgatgagcttgcagcgggccgccccctgacacttttcaagtctgacgacccc
agcgtggccgatggccagcagaagcgtgacttcatttgggtgggagactgcgttgacgtg
gtgctgtggctgctacggaatccccacgtctgcgggcttttcaactgcggcactggccag
gcgcgcagttacagtgatctggcacgcgccgtttgccaggcagcagataggccagaggcc
atcacctacgttcccatgccacagcggctgcaggggcagtaccaatactacacccaggct
aacatggatgcgttgcgggaagctggttatcaggcccccttcaccccacttgaggagggg
gtgcggcgttatgtgcaatcctaccttatgcaggcagggcctgctgggccgcgcacactt
tga
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