Formicincola oecophyllae: E3E12_04820
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Entry
E3E12_04820 CDS
T06093
Name
(GenBank) MiaB/RimO family radical SAM methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
swf
Formicincola oecophyllae
Brite
KEGG Orthology (KO) [BR:
swf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
swf03016
]
E3E12_04820
Enzymes [BR:
swf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
E3E12_04820
Transfer RNA biogenesis [BR:
swf03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
E3E12_04820
Prokaryotic type
Methylthiotransferases
E3E12_04820
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
Motif
Other DBs
NCBI-ProteinID:
QDH13626
UniProt:
A0A4Y6UAY8
LinkDB
All DBs
Position
complement(1088467..1089795)
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AA seq
442 aa
AA seq
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MTERTESPIPPTLSEGTDGSISLITFGCRLNAHESDAMAHYASQAQRQKGDEVQGKQTII
VNTCAVTGEAERQARQAVRRAHREHPQARIIITGCASERDKQRWMAMAGVDQVLDNATKA
TPAAWGLAESATTDAPPSRYTRALLQIQQGCDHDCTFCVIPQGRGRAHSITPDVILRRAR
ALTEAGHEEIVLTGVDIASWKGGEGGQAITGLGSLCRHLLDAVPAIKRLRLSSLDPALLQ
SSRLAMAGAPQQVDGALWDLIAGEERFMPHLHLSLQAGSDLILKRMKRRHLVEDALALVN
RARALRPGMGFGADLIAGFPTETEELFAETLAFVQESQLPFLHVFPYSPRPGTAAARIQP
LPRNVRQERAARLRQAGAANRAVFLANLVGQTCPVLMETPTTGHTPEFAPIAVPATTQLQ
PGQTIMLHVTSSDGEKLQGAPA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaggactgaaagtcccatcccccccaccctctcagaggggacagatgggtcc
atttcactcattacctttggctgcaggctcaatgcccatgaaagcgatgccatggcgcat
tatgccagccaagcgcagcgccaaaagggggatgaggtccagggcaagcaaactatcatc
gtcaatacctgcgccgtgacaggcgaagccgaacgccaagcgcgccaggccgtgcggcgc
gcccaccgggaacacccgcaggcgcgcatcatcatcaccggctgcgcttccgaacgcgac
aagcagcgttggatggccatggcaggtgtggaccaggtactggacaacgccaccaaggcc
acccctgcagcatggggcttggcggaaagcgccacaacagacgcccctccttcgcgctac
acccgcgcgttgctgcaaatccagcaaggttgcgaccatgactgcacgttctgcgtcata
ccgcaggggcgtgggcgtgcgcattccatcaccccagatgtcatcctgcgccgcgcccgt
gccctgacagaagctgggcacgaggaaatcgtcctcactggggtggacatcgcctcctgg
aaggggggtgaaggagggcaagctataacagggctgggcagcctgtgccgccacctcctt
gatgctgttcctgctatcaagcggctgcgcctctcctcccttgaccctgcgctgctgcaa
tcgtcacgtctggccatggctggggcgccccaacaggtggatggagcgctgtgggacctc
atcgctggtgaagagcgcttcatgccgcacctccacctttccctgcaggcgggcagcgac
ctcatcctcaaacgcatgaagcgccgccacttggtggaggatgctctcgcccttgtgaac
cgcgcccgcgcgctacgccccggcatggggtttggtgctgacctcattgcgggcttccca
acggaaacagaggaactgttcgccgaaacgctggccttcgtgcaggaaagccagctgccg
ttcctgcatgtgttcccttacagcccacgccctggcacagcggcggcgcgcatccagccc
ctaccgcgcaacgtgcgccaggaacgcgctgcacggctgcgccaagcgggcgctgcaaac
cgcgctgtttttctggccaatttggtgggccaaacctgcccggtgctgatggaaaccccc
accacaggccacacgcctgaattcgcgcccattgcagtgcccgccacaacacagctgcag
ccaggacagacaatcatgttgcacgtcacgtccagcgatggtgagaaactccaaggcgca
cccgcttaa
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