Formicincola oecophyllae: E3E12_04965
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Entry
E3E12_04965 CDS
T06093
Symbol
thrS
Name
(GenBank) threonine--tRNA ligase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
swf
Formicincola oecophyllae
Pathway
swf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
swf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
E3E12_04965 (thrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
swf01007
]
E3E12_04965 (thrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
swf03016
]
E3E12_04965 (thrS)
Enzymes [BR:
swf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
E3E12_04965 (thrS)
Amino acid related enzymes [BR:
swf01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
E3E12_04965 (thrS)
Transfer RNA biogenesis [BR:
swf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
E3E12_04965 (thrS)
Prokaryotic type
E3E12_04965 (thrS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
DUF5555
Motif
Other DBs
NCBI-ProteinID:
QDH13647
UniProt:
A0A4Y6UB12
LinkDB
All DBs
Position
complement(1122413..1124377)
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AA seq
654 aa
AA seq
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MPVITFPDGQTRTFGETVTGTTIAEAIGPGLLRAALAMEVDGKLVDMATPISQDAAVRFV
TRKDEEALELIRHDAAHVLAEAVQALWPETQVTIGPAIKDGFYYDFSREVPFTPEDFPAI
ENKMREIVASKAPFKRETWPRDEAIKFFENKGERFKAELIRDLPGDEEISIYRQGEWLDL
CRGPHLRTTEDVGTAFKLMRVAGAYWRGDHRNPMLTRIYGTAWRDKKELAAHLTQLEEAE
KRDHRRIGREMDLFHIQEEAVGQIFWHAKGWRLYNALQDYMRRAQGRHDYQEVRTPQLVD
RALWEASGHWDKYRENMFIAKVEDEDKTLALKPMNCPCHIQIFRHGLRSYRELPLRMAEF
GACHRYEPSGALHGLMRVRGFTQDDAHIFCTEDQIASETVAFVEMLEEVYRDLGFEAFKV
KFSDRPESRAGTDEIWDKAEQALKKACETAGVAWELNPGEGAFYGPKLEFVLTDAIGRDW
QCGTLQVDFVLPERLDATYIGEDSQRHRPVMLHRAILGSFERFLGILIEQFAGRFPLWLA
PVQVVVASIVTDAAPWAEDVARQLRAAGLAVETDTRNEKINAKVREHSLARVPVILVVGR
REAEEGTVAMRRLGGKAQEVLPLSEAIKRLRAEATPPDKLRQQENATVAAHMAG
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgccagtcatcaccttccccgacggccagacccgcacgttcggcgagacggtgacgggc
actaccatcgccgaggccataggccccggcctgctgcgcgccgccctagccatggaagtg
gacggcaagcttgtggacatggccacccccatcagccaagacgccgcagtgcggttcgtc
acccgcaaagatgaggaagcgctggagctcatccgccatgatgcagcccatgttctggca
gaggccgtgcaagctttgtggcctgaaacgcaggtcaccatcgggccggccatcaaggat
ggcttctattacgatttctcccgtgaggtccccttcacgccagaggatttccccgccatt
gaaaacaagatgcgcgaaatcgtcgcatccaaagcgcccttcaaacgcgaaacatggccg
cgtgacgaggctatcaagttcttcgaaaacaaaggcgagcgcttcaaggctgagctcatc
cgtgacctgccgggcgatgaggagatctccatctaccgccagggcgagtggcttgacctc
tgccggggcccgcacctgcgcacaacagaggatgtgggcacggcctttaagctgatgcgc
gttgctggcgcctattggcgtggtgaccaccgcaaccccatgctgacgcgcatctatggc
accgcatggcgcgacaaaaaggaacttgccgcccatctcacccagctggaggaggctgaa
aagcgcgaccaccgccgcattggccgggaaatggacctgttccacatccaggaagaggcc
gtggggcagattttctggcatgctaaaggctggcgcctttacaacgccctgcaggattac
atgcgccgtgcccaaggccgccatgattaccaggaagtgcgcaccccacaattggttgac
cgtgccttgtgggaggcttcaggccactgggacaagtaccgtgagaacatgttcatcgct
aaggtggaggatgaggacaagacccttgccctcaagccgatgaactgcccatgccatatc
cagattttccgccacgggctgcgttcctacagggaactgcctttgcgcatggctgagttc
ggcgcctgccaccgctatgagccttcaggcgcgctccatggtttgatgcgcgtgcgcggc
ttcacgcaagatgacgcccacattttctgcactgaagaccaaatcgccagtgaaaccgtg
gcctttgtggagatgctggaggaggtctaccgcgacctcggctttgaggcttttaaggtc
aagttctcagaccgccctgaaagccgcgccggcacagacgaaatctgggacaaagctgag
caagcgcttaagaaggcctgtgaaaccgcaggtgtggcttgggagcttaacccaggggaa
ggcgctttctatggtcctaaactggaattcgtcctgacagacgccatcggccgtgattgg
cagtgcggcaccctgcaggtggatttcgttctgcctgaacggctggacgccacctatatt
ggcgaagacagccaacgtcaccgccccgtcatgctgcaccgtgcgattcttggcagtttt
gagcgcttcctcggcattctcattgagcaattcgctggtcgcttcccgctttggctggca
cctgtccaggtagttgtggccagcatcgtgacggacgctgccccctgggcggaagacgtg
gccaggcagctgcgcgctgctgggttggctgtggaaacagacacccgcaatgagaagatc
aatgccaaggtgcgcgagcacagcttagcgcgcgtgcctgtcatcctagtagtgggccgg
cgggaggctgaagaaggcactgtggccatgcgccgccttggcggcaaagcgcaggaggtt
ctgcccctttctgaagctataaagcgcctgcgtgctgaagctaccccccctgacaagctg
cgccagcaggaaaacgccactgtggctgcgcacatggctggctga
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