Formicincola oecophyllae: E3E12_05900
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Entry
E3E12_05900 CDS
T06093
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
swf
Formicincola oecophyllae
Brite
KEGG Orthology (KO) [BR:
swf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
swf03032
]
E3E12_05900
03036 Chromosome and associated proteins [BR:
swf03036
]
E3E12_05900
03400 DNA repair and recombination proteins [BR:
swf03400
]
E3E12_05900
DNA replication proteins [BR:
swf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
E3E12_05900
Chromosome and associated proteins [BR:
swf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
E3E12_05900
DNA repair and recombination proteins [BR:
swf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
E3E12_05900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
Motif
Other DBs
NCBI-ProteinID:
QDH13793
UniProt:
A0A4Y6U8L4
LinkDB
All DBs
Position
1344355..1344687
Genome browser
AA seq
110 aa
AA seq
DB search
MIMSTAIENILVEAVTAAGGTLTAQQAAEAHRKYAELFAAQLAQHGLLEDRYLGRFHVSA
QKAYKMVNHLPHSKDFGKEIEVPASKRCDFDASIDLKEVINGQTAKFGVK
NT seq
333 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgtcgactgccatcgagaacatcctggttgaagccgtcaccgctgctggtggc
accctgactgcgcagcaggctgcagaagcccaccgcaaatatgctgaactgtttgccgcc
cagctggcccagcatggccttctggaagaccgttacctcggtcgtttccacgtttccgcg
cagaaagcgtacaagatggtcaaccatcttccgcacagcaaggattttggtaaggaaatc
gaagttcctgcctccaagcgctgcgattttgacgcttccatcgacctgaaggaagtcatc
aacggtcagactgcgaagttcggcgttaaataa
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