Formicincola oecophyllae: E3E12_06175
Help
Entry
E3E12_06175 CDS
T06093
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
swf
Formicincola oecophyllae
Pathway
swf00550
Peptidoglycan biosynthesis
swf01100
Metabolic pathways
swf01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
swf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
E3E12_06175 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E3E12_06175 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
swf01011
]
E3E12_06175 (mrdA)
Enzymes [BR:
swf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
E3E12_06175 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
swf01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
E3E12_06175 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QDH14437
UniProt:
A0A4Y6UDB1
LinkDB
All DBs
Position
1401223..1403178
Genome browser
AA seq
651 aa
AA seq
DB search
MFKRLFALLPRWGSSRPSFDASGTTHQTELLEGQGHGHNVFTRRALLVMAAQGSILGLLG
NRLYNLQLLEGDALKEKARRNRTSKRYLAPPRGLIVDRAGVTVAGNRVNWRAVITIEDLG
SLDAALAKLSAIVPLDDHDRARIARDRKRMRRFVPLVLKEFLTWDDMAAISLNAPSLPGV
LVDVGTTREYPFDELMAHIVGYVAPPNEKDVQKEPMLALPGMRVGRAGIEQTQEVVLHGK
PGYVSSEVNAVGRVISELERVDGVAGSTLGLTLDSVLQKQVRDRIGGRVASAVVMDCRNG
EIMAMVSTPSFQPGLFDSGVSHAQWQAWMSDPRAPLTDKVVSGLYPPGSTFKPAVALAAL
STGKVSPKDRFHCPGYYDVGGVRFHCWNRHGHGMVNMRAGLKFSCDCYFYQVARRCGMDA
IEQASNAMGMGVKLPIELPHVHAGVIPTPAWRKRHGGHWNTGDTVNAGIGQGYVQVSPLG
LATYTAALASGNLVQPHLVRSIEGRLVPPAQPKKLPFTEEQLSVVRGGMYAVVNEPYGSG
SRARLDMPGIQLAGKTGSAQVRHVSRALRESGHFNSMKLPWEYRPHALFICYAPYKNPRY
AVAVIVEHGNAGGKEAAPLARDIMADTLRRDPARRGQKTEGFVAQAGPVNG
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaacgccttttcgcactcctgccccgctggggtagctcccgcccttccttcgat
gccagcggcacgacccaccagaccgaacttctggagggccagggccacgggcacaatgta
ttcacccgccgcgcccttttggtcatggcggcgcagggcagcattctgggtttgttgggc
aatcgcctctacaacttgcagctgctggagggggacgcccttaaagagaaggcgcgccgc
aaccgcacaagcaagcgctacctggccccgccgcgcgggctgattgtggacagggccggg
gtcacggtggcgggcaaccgcgttaattggcgggctgtcatcaccattgaggatctgggc
agccttgatgcggcgctggcgaagctttcggccattgtgccgctggatgaccacgaccgc
gcccgtattgcgcgtgaccgcaagcgtatgcgccgcttcgtccccctggtcctgaaggag
ttcctaacttgggacgacatggcggccatcagcctcaatgcgccttccttgccaggggta
ttggtggatgtggggacaacgcgcgaatacccctttgatgagttgatggcgcacatcgtg
ggctatgtggcaccccctaatgagaaagacgtccagaaggagcccatgctggccctgcct
ggcatgagggtggggcgcgctggcattgagcagacccaggaagtggtcctgcacggcaag
cctggctatgtctcctcagaggtgaacgccgttgggcgcgtcatcagtgagttggagcgg
gtggatggcgtggcgggcagcacgcttggcctcacgctcgatagcgttttgcaaaagcag
gtgcgcgaccgtatcggcggccgcgtggccagcgctgtcgtgatggattgccgcaatggc
gagatcatggcgatggtcagcacgccttcattccagccggggctgtttgattcaggcgtc
agccatgcgcagtggcaagcctggatgagcgacccgcgcgcccccttgaccgataaggtg
gtgagtggcctttaccccccgggttccaccttcaagcctgctgtggcgctggcggcgctc
tccacaggtaaggtcagccccaaggaccgcttccattgtcctggctattatgatgttggc
ggtgtgcgtttccactgctggaaccgccatggccatggcatggtcaacatgcgcgctggg
ctgaagttttcctgtgactgctatttttaccaagtggccaggcgttgcggcatggatgcc
atcgagcaggcctctaacgccatgggcatgggggtgaagctgccaattgaactgccccac
gttcatgctggcgtcatcccgacccctgcatggcgcaagcgccacggtggccactggaac
acgggcgacaccgtcaatgcgggcattggccagggttatgtgcaggtttccccgttgggg
cttgccacttacacagccgccctggccagcggcaatttggtgcagccccatcttgtgcgc
tccattgaagggcgcttggtgcccccagcccagcccaaaaagctgcccttcaccgaggag
cagctctctgtggtgcggggcggcatgtacgcggtggtgaatgagccctatgggtctggc
tcgcgtgcgcggctggacatgccaggcattcagttggctggcaaaacgggctccgcccag
gtgcgccacgtctcccgcgcgctgcgtgaaagcgggcacttcaattccatgaagctgcct
tgggaatacaggccccacgcgctattcatctgctatgcgccttataaaaacccgcgctat
gccgtggccgtgattgttgagcacggcaatgctggcggcaaggaggcagcaccccttgcg
cgtgatatcatggcagacaccctgcggcgcgaccctgcgcgccgtggccagaaaacagaa
ggcttcgtggcgcaggctggccctgtcaatggctga
DBGET
integrated database retrieval system
