Formicincola oecophyllae: E3E12_06205
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Entry
E3E12_06205 CDS
T06093
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
swf
Formicincola oecophyllae
Pathway
swf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
swf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
E3E12_06205 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
swf01007
]
E3E12_06205 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
swf03016
]
E3E12_06205 (aspS)
03029 Mitochondrial biogenesis [BR:
swf03029
]
E3E12_06205 (aspS)
Enzymes [BR:
swf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
E3E12_06205 (aspS)
Amino acid related enzymes [BR:
swf01007
]
Aminoacyl-tRNA synthetase
Class II (A)
E3E12_06205 (aspS)
Transfer RNA biogenesis [BR:
swf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
E3E12_06205 (aspS)
Prokaryotic type
Other AARSs
E3E12_06205 (aspS)
Mitochondrial biogenesis [BR:
swf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
E3E12_06205 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
QDH13846
UniProt:
A0A4Y6UBJ5
LinkDB
All DBs
Position
1411310..1413157
Genome browser
AA seq
615 aa
AA seq
DB search
MHEYRTHTCNDLRAKDAGETVRLSGWVHSKRDHGGLLFIDLRDSHGITQIVVPVEESQFK
DMAHLRVESVITVTGKVVVREAGQFNPNLPTGEIEVRAEHIKVQSSAAVLPFQVAGQESY
PEDLRLKYRYLDLRRDKMRRNIQLRSKVIASMRRRMVEQGFTEFQTPILTASSPEGARDF
LVPSRNHPGKFYALPQAPQQFKQLAMVAGIDRYFQVAPCFRDEASRADRSPGEFYQLDFE
MAFATQEDVFTVLEPVLTGLFQEFTPEGWNITEGAFPRIPFEQAMADYGSDKPDLRNPLR
IKDVTEAFKDSGFGLFARITAEGGRVKAIPAPGAASKPRAFFDKLNSWAREQGAGGLGYI
TIAEDGTPKGPIAKNLEPARIAQIVATCGLKNGDSVFFAAGSDKNDATSKFAGQVRTKVA
EELDLIEKNAFRFCWVVDFPMYELNEETGKVDFSHNPFSMPQGGLEALNGKDPLDIKAYQ
YDIVCNGVELSSGAIRNHLPEVMLRAFEIAGYGPEVVEERFGGMLNAFRYGAPPHGGAAP
GVDRIVMLLADEPNIREVILFPLNQSGQDLMMEAPAAVEPERLKELSIKLDLPKPKATAG
KSTATKPAPQTNQAG
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgcacgagtaccgcacccacacctgcaatgatctgcgcgccaaggatgctggtgaaacg
gtgcgcctttccggatgggttcacagcaagcgcgaccatggcgggctgcttttcattgat
ttgcgtgacagccacggcatcacccagatcgtggtgcctgtggaggaaagccagttcaag
gacatggcccatctgcgcgttgaaagcgtcatcaccgttacaggcaaggtggttgtgcgc
gaggcggggcagttcaaccccaacctgcccacgggcgagatcgaggtgcgcgctgagcac
atcaaggttcagtcaagcgctgctgtgctgcctttccaggtggcggggcaggagagctac
cctgaggatttgcgcctgaagtaccgctaccttgatctgcgccgcgacaagatgcgccgc
aacatccagctgcgcagcaaggtcatcgcctccatgcgccggcgcatggttgagcagggg
ttcacggaattccaaactcccatcctcacggcttcctcccctgagggggcgcgtgacttc
ctggtgccctcacgcaatcaccctggcaagttctacgcactgccccaggccccccagcag
ttcaagcagcttgccatggtggctggcattgaccgttacttccaggtggccccctgcttc
cgtgacgaggcctcccgcgctgaccgcagccctggggagttctaccagctcgacttcgaa
atggccttcgccacgcaggaggacgtcttcaccgttttggagccagttctgacaggcctg
ttccaggaattcacgccagagggctggaacatcactgaaggcgccttcccgcgcattccc
tttgaacaggccatggctgattacggctccgacaagccggacttgcgtaatcccctgcgc
atcaaggacgtcacagaggcgttcaaggattcgggattcgggctgtttgcgcgcatcacc
gctgagggtgggcgggtgaaggctatcccggcgcctggcgccgccagcaagccacgcgcc
ttcttcgacaagctcaatagctgggcgcgtgagcagggcgctggcggccttggttacatc
accatcgctgaggacggcacccctaaaggacccatcgccaagaacctggagcctgcgcgc
atcgcccagatcgtggcgacgtgcggcttgaagaatggcgattcagttttcttcgccgct
ggcagtgacaaaaacgacgccacctccaaattcgctggccaggtacgcaccaaagtggcg
gaggagctggacctgattgagaagaacgctttccgcttctgctgggtggtggactttccg
atgtatgaactcaatgaagagacgggcaaggtcgatttctcccacaaccccttctccatg
ccgcaaggcgggttggaggccctcaacggcaaggacccgctggacatcaaagcttaccag
tatgacatcgtctgcaatggtgttgagctttcctcaggggccatccgcaaccatttgcct
gaagtcatgctgcgcgcctttgaaatcgcaggctatggtcccgaagtggtggaggagcgc
tttggcggcatgttgaacgccttccgctatggcgcgcccccccatggtggcgccgcccct
ggcgttgaccgcatcgtcatgctgctggctgatgagcccaacattcgcgaggtcatcctc
ttcccgctcaaccaaagtgggcaggatttgatgatggaggcgcctgctgctgtggagcca
gagcgcctcaaggagctttccatcaagcttgacctgcccaagcccaaggccacagctggc
aaaagtactgccaccaagcctgccccccagaccaaccaggcaggctga
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