Formicincola oecophyllae: E3E12_06535
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Entry
E3E12_06535 CDS
T06093
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
swf
Formicincola oecophyllae
Pathway
swf00300
Lysine biosynthesis
swf01100
Metabolic pathways
swf01120
Microbial metabolism in diverse environments
swf01230
Biosynthesis of amino acids
Module
swf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
swf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
E3E12_06535 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
swf01002
]
E3E12_06535 (dapE)
Enzymes [BR:
swf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
E3E12_06535 (dapE)
Peptidases and inhibitors [BR:
swf01002
]
Metallo peptidases
Family M20
E3E12_06535 (dapE)
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
QDH13897
UniProt:
A0A4Y6UBQ5
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Position
1485875..1487062
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AA seq
395 aa
AA seq
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MTQSAAIPARSALRDPLPLLQRLLRCPSVTPEDGGAMAVLAQALEGLGFEVKRLDFGSEG
AKTPNLWAVAGPIEDAAGKPAPFLCLGGHTDVVPPGPDWAQPPFAGVVADGSVWGRGAAD
MKGALAAFVAAVARRLEKGPLKGRLAFLITGDEEGPGRHGTRAVIEWLRAQGVRRPDFCL
LGEPSNPTHMGEIIKVGRRGSLNARVVVKGVQGHVAYPHRADNPLPRLVRLLDALSSTVL
DEGTERFAPSSLQVTSIDVGNQATNVIPGSAEARLNIRFNDAHSGASLTAWLEAMVDRHA
PGAALHVDVSGESFLTPCGHDVALLAQCVEDVTGHAPALDTGGGTSDARFITHWCPVAEF
GLVGATMHKRDEHVSLPSLEALTAITERFMVRMGV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagtcagcagccatcccagcacggtctgccctgagagaccccctccccctgttg
cagcgcctgctgcgctgcccttcagtcaccccagaagacggtggcgccatggccgtattg
gctcaggcgcttgagggactggggtttgaggtgaagcggttggattttggctctgaaggc
gccaagacccccaatttgtgggccgtggcaggaccgattgaagatgccgcaggcaagcct
gcgcccttcctgtgcttgggcggccacacggatgtggtcccccctggtcctgattgggcg
cagccaccttttgcgggggtggtggctgatggcagcgtgtggggccgcggtgcggccgac
atgaagggggccttggccgcttttgtggctgctgtggcgcgccggttggaaaaggggccc
ctcaaggggcgtttggcgttcctcatcacaggcgatgaggaagggccaggccgccacggc
acgcgcgctgtgattgaatggctgcgtgcgcaaggggtgcgcaggcctgacttctgcctg
ctgggggagccaagcaaccccacccatatgggcgagataatcaaggttggtcggcgcggc
agcctcaatgcccgcgtggtggtcaagggcgttcaaggccatgtcgcctatccccaccgc
gctgacaacccgctgccacgcttggtcaggctgcttgacgccctctccagcacggtcttg
gatgaaggcacggagcggttcgcgccgtcctccctgcaagtgactagcattgatgttggc
aaccaggccaccaacgtcatccctggcagcgctgaggcaaggctcaacatccgcttcaat
gacgcccacagcggcgccagcctcacagcgtggctggaggccatggtggaccgccatgcc
cctggcgcggcgctccatgtggatgtcagcggcgaatcattccttaccccgtgcggtcat
gacgtggccttgctagcgcagtgtgttgaggacgtgacgggccacgccccagcgcttgac
acaggtggtggcacctctgatgcgcgtttcatcacccattggtgccctgtggcggagttt
ggcttggtgggcgccaccatgcacaaacgtgatgagcatgtgagcctgccttcccttgag
gcgctaacagccatcacggagcgtttcatggtgcgcatgggggtgtga
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