KEGG   Formicincola oecophyllae: E3E12_06575
Entry
E3E12_06575       CDS       T06093                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
swf  Formicincola oecophyllae
Brite
KEGG Orthology (KO) [BR:swf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:swf03016]
    E3E12_06575
Enzymes [BR:swf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     E3E12_06575
Transfer RNA biogenesis [BR:swf03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    E3E12_06575
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: QDH13903
UniProt: A0A4Y6U8W0
LinkDB
Position
complement(1493707..1494360)
AA seq 217 aa
MGSESKAIHLHDGDLPDGLDLGPVVAIDTETMGLDQRRDRLCLVQISSGDGTAHLVQIKP
ESMGGKGANCPNLKAMLENPNVKKLMHYARFDVGILQHALGVRMTSVICTKIAARLVYTF
TDKHGLAFLTKDLLGIEMSKQQQCSDWGAPELTPEQLQYAASDVLHLHALWEKLEAMLVR
EGRRELAQQCFDFLPTRAELDSLGYDHPDIFSHSARL
NT seq 654 nt   +upstreamnt  +downstreamnt
atgggttccgaaagcaaggccattcaccttcatgacggcgacttgccagatggccttgac
ctgggcccggtcgttgccatcgacacagagaccatggggcttgaccagcgccgtgaccgc
ctttgcctggtgcagatctccagcggtgacggcacagcccacctggtgcaaatcaagcct
gaatccatgggcggcaaaggggccaactgccccaacttgaaagccatgcttgaaaacccg
aacgtcaagaagcttatgcattatgcgcgctttgacgttggcatccttcaacacgccctg
ggtgtgcgcatgacttcggtcatctgcaccaagatcgctgcccgcctggtctacaccttc
acagacaagcacgggctggctttcctcaccaaggatttgcttggcattgagatgtccaag
cagcagcagtgctctgactggggggcgcctgaactcacccctgaacagctgcaatacgct
gcctctgacgtgctgcaccttcatgctttatgggaaaagctggaggccatgctggtgcgc
gaagggcgccgggagctggcccaacaatgctttgacttcctgcccacccgcgctgagctg
gacagcctgggctacgaccaccccgacatcttctcccacagcgcacgcctgtaa

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