Formicincola oecophyllae: E3E12_06840
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Entry
E3E12_06840 CDS
T06093
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
swf
Formicincola oecophyllae
Pathway
swf00190
Oxidative phosphorylation
swf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
swf00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
E3E12_06840
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E3E12_06840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
swf03019
]
E3E12_06840
Enzymes [BR:
swf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
E3E12_06840
Messenger RNA biogenesis [BR:
swf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
E3E12_06840
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Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
QDH13944
UniProt:
A0A4Y6U9Q7
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All DBs
Position
1561237..1563591
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AA seq
784 aa
AA seq
DB search
MTKKTTTPAVTPNLSPTTQAQGGGHAQGAASQPKAPPTPEGGLTGEKLLASPERFLNREL
SWLDFNQRVIEEARNLRNPLLERVRFLAISASNLDEFYSVRVAGLVGQVREGTAVISPDG
KTPAQQLEAVRRKGRALKEEQQSLWRLLRAELAGAGVSIIKPGAISASDRAWLSDCFEKQ
IFPVLTPLAVDRSHPLPFIPNMGLALVLSLRERAQKPDGAGRDHPERLHEMDGIVLLPSR
LPRFIRLPDQPPVPNGQGEGAEPAQPQARFVQLEDVIALFGCRLFPHMDVTGAGLLRLVR
DTDVEFEDEAEDLVSAYESALKQRRRGVGIHLELDSVLPQALSRELGEEIGVSGHDLVAL
PEMVGLADLSQLVSAAGQPALLFPPYVPRLPQRIREFEGDCFAAIRAGDLLVHHPFESFD
VVVKFLQQAALDPNVLAIKQTLYRTSRDSPIVQALIEAAEAGKSVTAVVELRARFDEEAN
IRFSRALEAAGVQVVYGLAHYKTHAKLSLVVRREGRGLRSYAHFGTGNYHPVTARIYTDL
SYFTCNEDLCADSGRLFNYVTGWARPQRMNALSYAPVTLRHDLHELVCAEMDNARAGRPA
SIWLKMNSLVDPDLIDLLYEASRVGVRITALVRGMCSLRPGVKGLSDNIKVRSLVGRFLE
HSRIFAFGNGHHLPSREAKVFISSADWMQRNMDKRVEVMVPILEPAIHSAVLDDILAHDL
HDNLQTRVLGPNGDWRHVPCARKPFSAHAYFMETSALPAPPEAERMPAPYTPLERHHGGG
SHVS
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagaaaaccaccacccctgccgtgacacctaatctgagccccactacccaggcg
caggggggtgggcacgctcaaggcgccgcaagccagcccaaggccccacccacccctgaa
ggcgggctgactggggagaagctgcttgccagcccagagcgcttcctgaacagggagctt
tcctggctggatttcaaccagcgcgtgattgaggaggcccgcaacctccgcaaccccctt
ttggaacgggtgcgcttcctggccatcagcgccagcaaccttgatgaattctattccgtg
cgcgtggccggtctggtgggccaggtgcgggagggcacagccgttatcagccctgacggc
aaaacgcctgcccagcaattggaggccgtgcgccgtaaaggccgcgccttgaaggaggag
cagcagtcactgtggcgcctgctgcgggcggagctggcaggggctggcgttagcatcatc
aagccaggcgccatcagcgcttctgaccgcgcttggctgagcgactgctttgaaaaacag
atcttccctgtgctgacgccgctggcggtcgaccgttcccaccccctgcccttcatcccc
aacatggggttggcgctggtgctttcgctgcgtgaacgcgcccagaaaccggacggtgcg
ggccgtgaccaccctgagcgcctccatgagatggacggcatcgtgctgctgccatcgcgc
ttgccgcgcttcattcgcctgcctgaccagccaccagtacctaacggccagggggagggg
gcagaaccagcacagccccaggcccgcttcgtgcagctggaagacgtgatcgcgctgttt
ggctgcaggcttttcccccacatggacgtgacgggcgctggtctgctgcgccttgtgcgc
gacacggacgtggagttcgaggatgaggctgaggacctcgtcagcgcttatgaaagcgcg
ctcaagcagcgcaggcgcggcgttggcatccacctggagcttgactcagtcctgccccag
gcgctcagccgtgaactgggcgaggagatcggcgtcagcgggcacgaccttgtggcgctg
ccagagatggtgggcctggccgatctcagccagcttgtcagcgcagctgggcaaccagcg
cttttgttcccgccttacgtgccgcgcctgccccagcgcatccgcgagtttgagggggac
tgcttcgctgccatccgcgctggggacctacttgtccaccacccctttgaaagctttgac
gtcgtggtgaagttcctgcagcaggcagcgctggaccctaacgtgctggccatcaagcag
actttgtaccgcacatcgcgcgacagccccatcgtccaagccttgattgaggccgccgag
gccggcaagtccgtcaccgctgtggtggagctgcgcgctcgctttgatgaggaggccaac
atccgcttctcccgcgcgctggaggccgccggcgttcaagtggtgtacggcctggcccac
tacaagacccacgccaagctctccctcgtggtgcggcgggaggggcgtggcctgcgctcc
tacgcccattttggcacaggcaactaccaccccgtgacggcgcgcatctacacggacctc
tcctacttcacttgcaatgaggatctgtgcgctgattcagggcggttgtttaattatgtg
acgggctgggcgcgtcctcagcgcatgaacgccctctcctacgcgcctgtgacgctgcgc
catgacctccatgagctggtctgcgctgagatggataacgcgcgcgcaggcaggccagcc
agcatatggttgaaaatgaacagcctggtggacccggacttgatcgatttgctgtatgag
gcttcgcgcgtgggggtgcgcatcaccgcgcttgtgcgcggcatgtgctcgctcaggcct
ggcgtgaaggggctttcagacaacatcaaggtgcgcagcctggtggggcgcttcctggag
cattcgcgcattttcgcttttggcaacggccaccaccttccctcacgcgaggcgaaggtg
ttcatttcttccgctgattggatgcagcgcaacatggacaagcgcgttgaagtcatggtg
cccatcctggagccagccatccacagcgctgtgcttgatgacatcttggcccatgacctg
catgataacctccaaaccagggtgttggggccgaatggggattggcgccacgttccctgc
gcgcgcaagccgttctccgcccacgcttattttatggagacgtcagccctgccagccccg
cctgaggcagaacgtatgccagccccctacacccccttggagcgccaccatggtggagga
tcccatgtcagctga
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