Formicincola oecophyllae: E3E12_07250
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Entry
E3E12_07250 CDS
T06093
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
swf
Formicincola oecophyllae
Pathway
swf00860
Porphyrin metabolism
swf01100
Metabolic pathways
swf01110
Biosynthesis of secondary metabolites
swf01120
Microbial metabolism in diverse environments
swf01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
swf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
E3E12_07250 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
swf04147
]
E3E12_07250 (hemB)
Enzymes [BR:
swf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
E3E12_07250 (hemB)
Exosome [BR:
swf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
E3E12_07250 (hemB)
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Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
QDH14007
UniProt:
A0A4Y6UC16
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All DBs
Position
complement(1661786..1662781)
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AA seq
331 aa
AA seq
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MNGQFPHTRLRRNRHDDFTRRLVAENRLHVDDLIWPLFVCEGHGVREAIPTMPGQVRVSP
DRLAEHVAEAASLGVPALALFPVTPEGKRDANGSEALNPDNLMCRGARALKEAYPHMGLI
GDVALDPYTSHGQDGLLGEGGCVLNDESVAILCQMAVLQAQAGFDVIAPSDMMDGRIGAI
RTALDGAGLGTTRLMSYAAKYASAFYGPFRGAVGSGALLAGDKKTYQMDPANSGEALREV
ALDIAEGADMIMVKPGMPYLDVIARVHERFPVPLFAYQVSGEYAMLKAAMDKGWLDADKA
MMESLLAFKRAGCNGILTYFAVEAARHLRKQ
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaacggccagtttccccacacgcgcctcaggcgcaaccgccatgacgacttcaccagg
cgcctggtggctgaaaaccgccttcatgttgacgatctcatctggcccctgttcgtttgc
gaaggccatggcgtgcgcgaggccatccccactatgccagggcaagtgcgcgtcagccca
gacagactggctgagcacgtggcggaggccgcctcccttggggtgccggccctggcgctg
ttccccgtcacgccagagggcaagcgggacgccaacggctcagaagcgctgaaccctgac
aacctcatgtgccgcggcgcgcgcgccctcaaggaagcctacccgcacatgggcttgatt
ggcgatgtggcgctggacccctacacaagccacggccaggacggcttgctgggggagggg
ggctgcgtcctcaatgatgaatcagtggctatcctatgccagatggccgtcctgcaggcg
caagctggctttgacgttatcgccccttcagacatgatggacgggcgcattggcgccatc
cgcacagccttggacggcgctggccttggcacaacgcgcctgatgtcctacgcggccaag
tacgcctcagctttttatgggccgttcaggggggctgtaggctctggcgcgctgttggct
ggcgacaagaaaacctaccagatggaccccgccaattcaggcgaggccctgcgcgaggtc
gccctggacatcgctgagggcgccgacatgattatggtcaagccaggcatgccttacctt
gacgtcatcgcgcgcgtgcatgaacgcttcccggtgccgctgttcgcctatcaggtctct
ggggagtatgccatgctcaaggccgccatggacaaaggctggctggacgctgacaaggcc
atgatggaaagcctgctggccttcaagcgcgctggctgcaacggcattctgacttatttc
gccgttgaggccgcccgccacctgcgcaagcagtga
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