Formicincola oecophyllae: E3E12_07260
Help
Entry
E3E12_07260 CDS
T06093
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
swf
Formicincola oecophyllae
Pathway
swf00260
Glycine, serine and threonine metabolism
swf00460
Cyanoamino acid metabolism
swf00630
Glyoxylate and dicarboxylate metabolism
swf00670
One carbon pool by folate
swf00680
Methane metabolism
swf01100
Metabolic pathways
swf01110
Biosynthesis of secondary metabolites
swf01120
Microbial metabolism in diverse environments
swf01200
Carbon metabolism
swf01230
Biosynthesis of amino acids
swf01240
Biosynthesis of cofactors
swf04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
swf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
E3E12_07260
09102 Energy metabolism
00680 Methane metabolism
E3E12_07260
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
E3E12_07260
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
E3E12_07260
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
E3E12_07260
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
E3E12_07260
Enzymes [BR:
swf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
E3E12_07260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QDH14009
UniProt:
A0A4Y6U974
LinkDB
All DBs
Position
1664640..1665929
Genome browser
AA seq
429 aa
AA seq
DB search
MTTHDSQATQAFFHASLNERDPETAAILNQELKRQADGIELIASENMASQAVMEAQGSVL
TNKYAEGLPGKRYYGGCVDVDKVENLAIERLKKLFGVQYANVQPHSGANANQAAFMALVK
PGDTILGMSLAAGGHLTHGAAPNYSGKWFKAVQYGVRKDDGRLDYDEMERLAREHKPSLI
VAGASAYPREIDFARFRRIADEVGAALMVDMAHYAGLVATGLYPSPVPFADIVTTTTHKT
LRGPRGGVVMTNNPDIAKKLNSAVFPGLQGGPLMQVIAGKAVAFGEALKPDFKAYQQRVL
ANARALSDELAKRGFDIVSGGTDCHLILVDLRPKGVTGKVAENLLERAGITANKNAVPFD
PEKPFVTSGLRLGSPAATTRGFGEGEFRDIARMIDEVLSAGDDEATIQKVRAEVEALCKR
FPIYSHAWA
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccatgacagccaggcgacccaggcgttcttccacgccagcctgaatgagcgc
gaccccgaaaccgccgccatcctcaaccaggaacttaaacgccaggcagacggcattgag
ctgatcgcctctgagaacatggcctcccaggctgtgatggaggcccaagggtccgtcctg
accaacaagtacgctgaaggcctgcctggcaagcgctactatggcggctgcgttgacgtg
gacaaggtggagaacctggccattgagcgcctgaaaaagctgttcggcgtccagtacgct
aacgtccagccccacagcggcgccaacgccaaccaggccgccttcatggcgctggtcaag
cctggcgacaccatcctgggcatgagcttggctgctggcggccacctgacgcacggtgcg
gcccccaactattcaggcaagtggttcaaggctgtgcagtacggcgtgcgtaaagatgac
gggcgccttgattatgatgagatggagcgcctggcgcgtgagcacaaaccgagcctgatc
gtggctggtgcctccgcctacccgcgtgagattgactttgcgcgcttccgccgcatcgct
gacgaggtgggcgctgccctgatggtggacatggcccactacgcaggcctggtcgccacg
ggcctctaccccagcccggtgccctttgctgacatcgtcaccaccaccacgcacaagacc
ttgcgtggcccgcgcggcggcgttgtaatgaccaacaatcccgacatcgccaagaagctc
aactcagccgtgttcccagggctgcagggcggcccgctgatgcaggtcatcgctggcaag
gccgtagcatttggggaggctctgaagccagacttcaaggcttaccagcagcgtgtcctg
gccaatgcgcgcgccctttcagacgaacttgccaagcgcggctttgacatcgtctcaggc
gggacggactgccacctcatcctggtggacctgcgccctaagggcgtcaccggcaaagtg
gctgagaacctgcttgagcgcgcaggcatcacagccaacaaaaacgccgtccccttcgac
cctgaaaagcccttcgtgacgtcaggcctgcgcctgggcagccctgctgccaccacgcgc
ggctttggggagggggagttccgcgacatcgcccgcatgattgacgaagttctgagcgct
ggcgatgacgaagccaccatccagaaagtgcgcgctgaggtagaagcgctgtgcaagcgc
tttcccatctacagccacgcctgggcctga
DBGET
integrated database retrieval system