Formicincola oecophyllae: E3E12_08465
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Entry
E3E12_08465 CDS
T06093
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
swf
Formicincola oecophyllae
Pathway
swf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
swf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E3E12_08465 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
swf03400
]
E3E12_08465 (recF)
DNA repair and recombination proteins [BR:
swf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
E3E12_08465 (recF)
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_29
AAA_15
AAA_27
AAA_22
AAA_30
ABC_tran
AAA_16
cobW
Motif
Other DBs
NCBI-ProteinID:
QDH14214
UniProt:
A0A4Y6UAP1
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Position
complement(1919842..1921050)
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AA seq
402 aa
AA seq
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MAQNVHISKLTLTDFRNYTRLSWRPGPGLTILTGPNGAGKTNVLEAVSLLAPGRGLRAAP
LGRLAYQPPGGEGLRGGWGVAAELTVESPHGQEAITLATAVEEGQRRRQFRLDGEAVRSQ
ADVADWFACVWQTPAMDRLCSEGAGGRRRFLDRLVVAHQPGHAREMAAHEQALAGRNRLL
AAPPGTWDHDWLDALEASLSRHAVAATAARLAFLEAMAALPAPPSPPSSTRHAFPRSLLE
LSCPLAERLASMPALEVEEWMKATLRQNRQEDALRGYCGFGAHKAHFTLRDATTGRLGGE
ASSGQQKTMVLGTLLDHARLMAQVGPVRPVLLLDEPLLHLDALHREALMERLLEAGATAL
LTGTDRSTFAPLEGQAAFWGVETGAEGSPTLQRLPSLPTLGA
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcagaacgttcacatcagcaagctcaccctgacggacttccgcaactacacacgc
ctatcatggcgccctggacctggcctcaccatactcacagggcctaacggggccggcaaa
accaatgttctggaggctgtctccctcctggcgcctgggcgcggcctgcgcgcggccccc
ttagggcgcctggcctaccaaccccctggtggggaagggctgaggggggggtggggtgtt
gctgcggaattgactgtggaaagcccccatgggcaggaggccatcaccctggccaccgct
gtggaggaaggccagcgccggcgccagttccgcttggatggcgaagctgtgcgcagccag
gctgacgtggctgattggttcgcctgcgtgtggcagacccccgccatggacaggctgtgc
agcgagggcgcaggcgggcgcaggcgttttctggaccgcctggtggtggcccaccagcca
ggccatgcgcgggaaatggccgcccatgagcaggccttggctgggcgcaaccgccttctg
gctgccccgccaggaacatgggaccatgattggcttgatgcgcttgaggcctccctcagc
cggcatgctgttgccgccacggcagcgcgcctggctttcctggaggccatggcggccttg
ccagcgccgccttcccccccctcgtcaacgcggcacgccttcccccgcagcctgctggag
ctttcctgccccttggctgaacgcctggcttctatgccggcactggaggtggaggaatgg
atgaaagccaccttgcgccaaaaccgccaggaggacgctctgcgcggctactgcggcttt
ggcgcgcacaaagcgcatttcacgttgcgggatgccaccacagggcgcttggggggggag
gccagcagtggccagcagaaaaccatggtgttgggaacgctcctcgaccatgcgcgcctg
atggcgcaggtgggtcccgtcaggccagtgctgcttctagacgagcctttgctgcacttg
gacgccctccaccgcgaggccttgatggaacgcttgcttgaagcgggcgccacagccctg
ctgaccggcacggaccgcagcaccttcgcccccttggaaggtcaggcggcgttctggggg
gtggaaacaggcgctgaaggcagccccacccttcagagactgccctccttgccaacgctt
ggggcgtga
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