Rhizorhabdus wittichii RW1: Swit_0045
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Entry
Swit_0045 CDS
T00538
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
swi03032
]
Swit_0045
03036 Chromosome and associated proteins [BR:
swi03036
]
Swit_0045
03400 DNA repair and recombination proteins [BR:
swi03400
]
Swit_0045
DNA replication proteins [BR:
swi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Swit_0045
Chromosome and associated proteins [BR:
swi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Swit_0045
DNA repair and recombination proteins [BR:
swi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Swit_0045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
DUF2267
MSP1_barrel
2C_adapt
Motif
Other DBs
NCBI-ProteinID:
ABQ66418
UniProt:
A0A9J9H7K8
LinkDB
All DBs
Position
46707..46979
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AA seq
90 aa
AA seq
DB search
MNKQELIGTVAEATGMTKNDASKAVEAVFDSITTQLKKGDEVRLVGFGTFSVTKRKASTG
RNPRTGEPMKISASSQPKFKPGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacaggagcttatcggcaccgtcgccgaggccaccggcatgaccaagaatgat
gcttcgaaggcggtcgaagctgtgttcgattcgattaccacccagctcaagaagggcgac
gaggtccgcctcgtcggtttcggcactttctcggtgacgaagcgcaaggcctccaccggc
cgcaacccgcgcaccggcgaacccatgaagatcagcgcatcgagccagcccaagttcaag
ccgggcaagggcctgaaggacgccgtcaactag
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