Rhizorhabdus wittichii RW1: Swit_0055
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Entry
Swit_0055 CDS
T00538
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi03030
DNA replication
swi03430
Mismatch repair
swi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Swit_0055
03430 Mismatch repair
Swit_0055
03440 Homologous recombination
Swit_0055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
swi03032
]
Swit_0055
03400 DNA repair and recombination proteins [BR:
swi03400
]
Swit_0055
Enzymes [BR:
swi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Swit_0055
DNA replication proteins [BR:
swi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Swit_0055
DNA repair and recombination proteins [BR:
swi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Swit_0055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_5
AAA_16
AAA_30
AAA_14
AAA_19
DUF815
AAA_assoc_2
AAA_24
AAA_18
BKACE
PIF1
Glyco_tranf_2_5
Motif
Other DBs
NCBI-ProteinID:
ABQ66428
UniProt:
A0A9J9H7P5
LinkDB
All DBs
Position
53421..55169
Genome browser
AA seq
582 aa
AA seq
DB search
MSESSTPYRVLARKYRPQNFNELIGQDAMVTTLANAIRRGRLAHAFLLTGVRGVGKTSTA
RLIAKALNCIGPDGQGGPTIDPCGVCEPCVAIAEGRHIDVVEMDAASHTSIDDVREIIEA
VRYASVSARYKIYIIDEVHMLSKSAFNGLLKTLEEPPAHVKFLFATTEVNKVPITVLSRC
QRFDLRRITADKLAAHFTNVVAAEGVEADPEALALIARAAEGSARDGLSILDQAIAHGSG
RVEAQQVRDMLGLSDRGAVRRLFGEMLKGDAAAVLASIRGQYDLGVEPVAMLHGLLETCH
AITRAKVAGTDDPALSAEEREAYGDWAGKLGFATLHRLWQLLLKGHGEVQTAAMPIEAAE
MALLRVVHASQLPDPGELARRLASGDLNLPVQPAPAQPPAAEPQGALMAAPAPIAAPAPA
PAPIETPPPLAAVPAPAPVVAPVPVAIPEPEPEPAPPSLPATGEAIHALLLPENALLAQL
FHDYAAIVRLEGEELLIARHQRLPQNFAGDVANILKRSTGRTWSVAMVDEAGAPSLLARI
RAEEDAARDAILESPLVKAALEAFPDAELIDYSAPEKRSLAS
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaatcctcgacaccctatcgcgtcctcgcgcgcaaatatcggccgcagaatttc
aacgagctgatcggccaggacgcgatggtgacgaccctcgccaacgcgatccggcgcggc
cggctggcgcatgccttcctgctgaccggcgtgcgcggcgtcggcaagacctcgaccgcg
cggctgatcgccaaggcgctcaactgcatcgggccggacgggcagggcgggccgacgatc
gatccttgcggcgtctgcgagccctgcgtcgcgatcgccgaggggcggcatatcgacgtg
gtcgagatggacgccgccagccacaccagcatcgacgacgtccgcgagatcatcgaggcg
gtgcgctatgcgtcggtgtcggcgcgctacaagatctacatcatcgacgaagtccacatg
ctgtcgaagtcggccttcaacggcctgctcaagacgctggaggagccgccggcgcatgtg
aaattcctgttcgccacgaccgaggtgaacaaggtcccgatcaccgtcctgtcgcgctgc
cagcgcttcgacctgcggcgcatcaccgccgacaagctggccgcgcacttcaccaacgtc
gtcgcggccgagggcgtcgaggccgatcccgaggcgctggcgctgatcgcgcgggcggcc
gaaggctcggcgcgcgacggcctgtcgatcctcgaccaggcgatcgcgcacggatcgggc
cgggtcgaggcgcagcaggttcgcgacatgctgggcctgtccgatcgtggcgcggtccgc
cgcctgttcggcgagatgctgaagggcgacgcggcggcggtgctggcgagcatccggggg
caatatgacctcggcgtcgagccggtggcgatgctgcacgggctgcttgagacctgccat
gcgatcacccgcgccaaggtggccgggaccgacgatcccgcgctgtcggccgaggagcgc
gaggcctatggcgactgggccggcaagctcggcttcgcgacgctccaccggctgtggcag
ctcctgctcaagggccatggcgaggtccagaccgccgccatgccgatcgaggcggccgag
atggcgctgctccgcgtcgtccatgccagccagcttcccgatccgggcgagctggcgcgc
cggctcgcctcgggcgacctgaacctgcccgtccagcccgcgcccgcccagccgccggcg
gccgagccgcagggggcgctgatggccgcgccggcgcccattgccgctcctgcgcctgcg
cccgccccgatcgagacgccgccgccgctggccgccgtgccggccccggccccggtcgtc
gctccggttccggtcgcgatccccgagcccgagccggaacccgcgccgccgtcgctgccc
gcgaccggcgaggcgatccatgcgctgctgctgccggaaaacgcgctgctcgcgcagctc
ttccacgattatgcggcgatcgtccggctggaaggcgaggagctgttgatcgcgcgccac
cagcggctgccgcagaatttcgccggcgacgtcgccaatatcctcaagcgatccaccggc
cggacctggtcggtcgctatggtcgacgaggcgggcgcgccctcgctgctcgcccggatc
cgcgccgaagaggacgcggcgcgcgacgccattctcgaatccccgctggtcaaggccgct
ctggaagcctttccggatgccgagctgatcgactacagcgcccctgaaaaacggagtctc
gcatcatga
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