Rhizorhabdus wittichii RW1: Swit_0108
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Entry
Swit_0108 CDS
T00538
Name
(GenBank) diguanylate cyclase/phosphodiesterase
Organism
swi
Rhizorhabdus wittichii RW1
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GGDEF_2
PAS_8
Phage_attach
Motif
Other DBs
NCBI-ProteinID:
ABQ66480
UniProt:
A0A9J9H7P0
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Position
105080..106864
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AA seq
594 aa
AA seq
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MRAAKTHIMSTSDRVGSDPSLPVHKLPAALQELLDTPRSAAQQEFIDTLPIAIALVCLVD
RKPAILARNRAFLQLADRHSSRREIDPGRDLCVGIALPLLPEIEDFLNGDESDRSFDMQE
GDGISGRHFAVRLSRLSGGESPVPRCILSLIDRTQQVEGERSLRTQMLRDSLTGLPNRAA
FAEQAEHAMLNYAAEGRQFAVLLIDLTRFSRVNEGVGSLAGDELIITVARRLVSALRAGD
VLARLAGDEFAVLLGVADDPSEAIAAARRMQACLATPIRLGDLEIKIDCAVGVAMMAPAI
DDAEDLIRNAQIAMKRAKQSGHAELYQAGDSVTARQRFSLETELRRAIERDQLHLAFQPL
IELSTGRVIGFEALARWDHPEKGAISPVDFIPVAEESGLIVALGRWALRAATRTLAEWDR
RAGAPLPVHMAVNVSAVQFQRDDVVSAIKAALTESGIAGSRLKIELTESCIVTDPDGIAR
VLRAIHGLDVTIAMDDFGTGYSSLTYLQRLPIDVLKIDRSFVAPMLHDRDSVAIVRAILG
LASALGMATTAEGVESEALIETLIGLGCDIAQGYYFARPLPSDEAFAYLRSRPA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcggcgaaaacccatatcatgtctacatccgatcgggtcggcagcgatccctca
ttgcccgtgcacaagctccccgccgcgctccaggaactgctcgacacgccgcgctcggcc
gcgcagcaggagttcatcgacaccctgccgatcgcgatcgcgctggtctgcctggtcgat
cggaaaccggcgatattggcgcgaaaccgcgccttcctgcagctcgccgaccgtcatagc
agccgccgcgagatcgatccgggccgcgacctgtgcgtcggcatcgccctgccgctgctc
cccgagatcgaggatttcctgaacggcgacgagagcgaccggtcgttcgacatgcaggag
ggcgacggcatcagcggacgccatttcgcggtccgcctgtcgcgcctgtcgggcggcgaa
tcacccgtgccgcgctgcatattgtcgctgatcgaccgcacccagcaggtcgagggcgaa
cgctcgctgcgcacccagatgctgcgcgacagcctgaccggcttgcccaaccgcgcggcc
ttcgccgagcaggccgagcatgcgatgctcaactatgcggccgaggggcgccagttcgcg
gtgctgctgatcgacctcacccgcttcagccgggtcaatgagggggtcggctccctggcc
ggcgacgaactgatcatcaccgtcgcgcgccgcctggtctcggcgctgcgcgcgggcgac
gtgctggcgcggctggccggcgacgaattcgcggtgctgctcggcgtcgccgacgatccg
tcggaggcgatcgcggccgcgcgccgcatgcaggcctgcctcgccacgccgatccggctc
ggcgatctcgagatcaagatcgactgcgcggtcggggtggcgatgatggcgcccgcgatc
gacgatgccgaagacctgatccgcaacgcccagatcgcgatgaagcgcgccaagcagtcg
ggtcatgccgaactctaccaggccggcgacagcgtcaccgcgcgccagcgcttcagcctg
gagaccgagctgcgccgcgcgatcgagcgcgaccagctccatctcgccttccagccgctg
atcgagctgtcgaccggccgggtgatcggcttcgaggcgctcgcccgctgggaccatccc
gaaaagggcgcgatctccccggtcgacttcatcccggtcgccgaggagtcggggctgatc
gtcgcgctcggccgctgggcattgcgcgccgccacccgcaccctcgccgaatgggaccgc
cgggcgggcgcgccgctgccggtccatatggcggtcaacgtctcggcggtgcagttccag
cgcgacgacgtcgtctcggcgatcaaggccgcgctgaccgagagcggcatcgccggcagc
cggctcaagatcgagctgaccgaaagctgcatcgtcaccgatccggacggcatcgcccgg
gtgctgcgcgcgatccacggcctcgacgtcaccatcgcgatggacgatttcggcaccggc
tattcgagcctcacctatctgcagcggctgccgatcgacgtgctgaagatcgaccgcagc
ttcgtcgcgccgatgctccatgaccgcgactcggtcgcgatcgtccgcgccatcctcggc
ctcgcctcggcgctgggcatggcgacgaccgccgagggcgtcgaatcggaagcgctgatc
gagacgctgatcgggctcggctgcgacatcgcccagggctattatttcgcccggccgctg
ccgtcggacgaggccttcgcctatctgcggtcgcgtccggcctga
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