Rhizorhabdus wittichii RW1: Swit_0196
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Entry
Swit_0196 CDS
T00538
Name
(GenBank) helicase domain protein
Organism
swi
Rhizorhabdus wittichii RW1
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Helicase_C
NOV_C
SNF2-rel_dom
ResIII
DEAD
SLFN-g3_helicase
Helicase_C_4
NCBP3
Helicase_RecD
ERCC3_RAD25_C
Borrelia_P83
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ABQ66567
UniProt:
A0A9J9H7Y8
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Position
187508..191011
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AA seq
1167 aa
AA seq
DB search
MGARLEDIKNGASVRGIGSAQPVQVVSVDWIGDQAINVVYRDHNGVVAEAVLYRDDEHQL
AVEQAGRPWSFDADGALLRLVTEANRIKLAHYFDPYLAIHTSLVDPLPHQISAVYGEMLP
RQPLRFLLADDPGAGKTIMAGLLMKELIARSDLERCLVVAPGSLVEQWQDELGQKFNLEF
DILTRDMIETSRSGNPFSDRDRLIVRLDVLARNEELQEKLMSAREWDLIICDEAHRMSAT
YFGGEVKYTRRYQVGQKLGQVCRHLLLMSATPHNGKEEDFQLFMALLDGDRFEGRFRDGV
HYADTADMMRRLTKEELLKFDGRPLFPERRAYTVKYELSEGEAALYTAVTDYVRTEMNRV
QRFAEGDGKKRNNVGFALQILQRRLASSPAAIYQSLKRRRERLENELGEARLATRGRRTG
IDEPSVGPDVLRNIEEYGQDEIDELEELISTGATTAETVEQLALEVETLKGLEAMALGVL
RSGVDTKWSQLNRILDDDLMVDAAGNRRKLIIFTEPKDTLHYLLDKVRARLGNAEAVDVI
HGGVSREERRKVIERFMQDKDLLVLIANDAAGEGVNLQRGHLMVNYDLPWNPNKLEQRFG
RIHRIGQTEVCHLWNLVAADTREGEVYARLLEKLEAAREALGGRVYDVLGELFEGIALKD
LLFQAIQYGEQDEVKARLFRQVDGAVDQGHLLELLRRRALTNDTMPEAKVEELRLEMERA
EALRLQPHHIQSFFVEAFQHLGGRLKRREEGRWEITHVPVRIRERDRQIGTGAPLQKQYE
RICFEKGLIHQQPVAAFVCPGHPLLEAVISLIREQYEQIMRQGAILVDDTDAGDALSAIF
LLEHIVQDGRATSAGKPHVISQRLQFAAIDKAGDARNAGIAPHLNLRPATAEEAGVVRDL
LDEDWLTSELERTAIRFATVELAQGHVAEVKARRLPEIEKVEQEVRARLKKEINYWDSRA
FELKEEEKAGKKTRLNWQNAQRRAEELAERQKRRMDQLERERFISSQPPRVRGGMVVIPR
GLLEARHSPAVANRFAEDPAARRAIELAAMEAVMAAERALGHAPVDVSAQKIGYDIASHD
PKSGHLRFIEVKGRIDGADSVMITRQEVITSLHEPEKFILAIVPVASGFAHEPHYVRGAL
VEREPSFLETAIQFDLRRLLARAESPR
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgggggcacgactagaggacatcaagaacggcgcatcggttcgcggtatcgggtccgcg
cagccggttcaggtcgtgtcggtcgactggatcggcgaccaggcgatcaacgtcgtctac
cgcgaccataatggcgtggtcgccgaggccgttctctaccgggacgatgagcaccagctc
gccgtcgagcaggctgggcgtccttggtcgttcgatgctgacggtgcgttgctgcgcctg
gtgaccgaggccaaccgcatcaaactggcgcattatttcgacccctatctcgcgatccac
acgagccttgttgatccgttgccgcaccagatttcggcggtctatggcgagatgcttccg
cgccagccgttgcgcttcctcctcgccgacgatcccggcgccggcaagacgatcatggcc
ggtctgctcatgaaggagctgatcgcgcgcagcgatctcgagcgctgcctggtggttgca
cctggcagcttggtcgagcagtggcaggatgagctcggtcagaagttcaatctcgagttc
gacatcctcacgcgagacatgatcgagacctcgcgctcgggcaatccgttcagtgatcgg
gaccggttgatcgtccgcctcgacgtgctggcgcgcaacgaagagctgcaggaaaagctc
atgagtgcgcgcgaatgggacctcatcatctgcgacgaagcgcaccggatgtcggcgacc
tatttcggcggtgaggtcaaatatacccggcgctatcaggtcggtcagaagctcggccaa
gtctgccgccacctgctcttgatgtcggcgacgccgcacaacggcaaggaagaggacttc
cagctgttcatggcgctgctcgacggcgaccgctttgaggggcggttccgcgacggcgtc
cattatgccgacaccgccgacatgatgcggcggctgaccaaggaggagctgctcaagttc
gatggccggccgctgttccccgaacggcgcgcctacaccgtgaaatatgagctctccgag
ggcgaagccgcgctctacactgcggtcaccgactatgtgcgcaccgagatgaaccgagtg
cagcgttttgccgaaggtgacggcaagaaacgcaacaatgtcggcttcgcgttgcagatc
ctccagcgccgactcgcctcatctccggccgccatctatcaatcgctgaagcgccgccgc
gagcggttggagaacgagctgggcgaagcgcgccttgccacgagagggcgtcgcacgggg
atcgacgagccgtcggtcggccccgacgtgctgcgcaatatcgaggaatatggccaggac
gagatcgacgaactcgaggagctgatctcaaccggcgcgacgacggccgagactgtcgag
cagctcgcccttgaagtcgaaacgctgaagggtctggaagcaatggcgcttggtgtgttg
cgctcgggcgtcgacaccaaatggagtcagctcaaccgcattctcgacgacgatctgatg
gtcgatgcggccgggaatcgtcgcaagctgatcatttttaccgagcccaaggacacgctc
cactacctgctcgacaaggtgcgcgcgcgcctcggtaacgccgaggcggtcgatgtgatt
catggcggcgtgtcgcgcgaggaacgccgcaaggtgatcgagcgcttcatgcaggacaag
gacctgctcgtactgatcgccaacgacgccgccggcgaaggcgtcaatcttcagcgcggg
catctgatggtcaattacgacctcccctggaatcccaacaagcttgagcagcgtttcggt
cgcattcatcgcatcggtcagaccgaggtgtgccacctttggaacctggtcgcggccgac
actcgcgagggtgaggtctatgcgcgtctcctcgaaaagctagaggccgcgcgcgaggcg
ctaggcggccgcgtctacgacgtgctcggcgagttgtttgagggcatagcgctcaaggac
ctgctcttccaagcgatccagtatggcgagcaggatgaggtgaaggcgcggctgttccgg
caagttgacggggctgtcgatcagggtcacttgctcgaattgctccggcgccgggccctc
accaacgacaccatgcccgaagccaaggtcgaagaactccggctcgaaatggagcgagcc
gaggcactgcgcctgcagccgcaccatatccagagcttcttcgtcgaggcgttccagcat
ctgggcgggcgcctcaagcgccgcgaggaagggcgctgggaaatcacgcatgtgccagtg
cgcatccgcgagcgcgaccggcagatcggcaccggcgcgccgcttcagaagcaatatgag
cggatctgcttcgagaagggtctgatccaccagcagccggtcgccgcgtttgtttgtccc
ggccacccgctgctcgaggccgtgatcagccttatccgcgagcaatacgagcagatcatg
cgccagggcgcgattctcgtcgacgataccgatgccggcgacgctctctcggcgatcttc
ctcttggagcacatagtccaggacggccgcgcgacgagcgccggcaagccacacgtgatt
tcgcagcgactccagttcgccgcgatcgacaaagccggcgatgcccgcaacgcgggcatc
gcgccgcaccttaacctgcggcccgcaacggccgaagaagccggcgtcgtgcgcgatctg
ctcgatgaggactggctgaccagcgagctggaaaggaccgccatccgcttcgccaccgtc
gagctggcgcaagggcatgtcgccgaggtcaaggcgcggcgcctgcccgagattgagaag
gtcgagcaggaggtccgcgcccggctcaagaaggagatcaattattgggactcacgcgcc
ttcgagctcaaggaggaagagaaggccggcaagaagacgcggctcaattggcagaatgcc
cagcgacgcgccgaggaactagcggagcgccagaagcggcggatggaccagctcgaacgc
gagcggttcatctcgtcacagccgccgcgggtgcgcggcggcatggtggtcatcccgcgc
ggtctgctggaggctcgtcattctcccgccgtggcgaaccgtttcgccgaggacccggca
gcgcggcgagcgatcgagcttgccgcgatggaagcagtcatggccgccgagcgcgcgctg
ggacacgcgccggtcgacgtctctgcccagaagatcggttacgatatcgcctcgcacgat
ccgaaatctgggcatttgcgcttcatcgaggtcaagggccgcattgacggggcggactcc
gtgatgatcacgcgccaggaagtcattacctcgctgcacgagccagagaagttcattctg
gcgatcgtgcccgtcgctagcggctttgcgcatgagccgcactatgtgcgcggggcgctt
gtcgagcgcgaaccatcgttcctcgagacggcgattcagttcgacttgcggcgtttgttg
gcgcgggcggagtcaccgcgatga
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