Rhizorhabdus wittichii RW1: Swit_0209
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Entry
Swit_0209 CDS
T00538
Name
(GenBank) RNAse III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Swit_0209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
swi03019
]
Swit_0209
03009 Ribosome biogenesis [BR:
swi03009
]
Swit_0209
03036 Chromosome and associated proteins [BR:
swi03036
]
Swit_0209
Enzymes [BR:
swi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Swit_0209
Messenger RNA biogenesis [BR:
swi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Swit_0209
Ribosome biogenesis [BR:
swi03009
]
Eukaryotic type
90S particles
RNase
Swit_0209
Prokaryotic type
rRNA processing factors
Swit_0209
Chromosome and associated proteins [BR:
swi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Swit_0209
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
ABQ66580
UniProt:
A0A9J9H7V5
LinkDB
All DBs
Position
complement(209421..210125)
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AA seq
234 aa
AA seq
DB search
MTQSPRSAKARAMNDTALRAWIADTLGHEPRDLALFERALTHGSYGPNHYERLEFLGDRV
LGLVAGAWLFELFPDEPEGKLSRRLNAIVSRETCADVGRAIGVATHMKLGKQARDDGAVQ
SDNVLGDVVEALIGALYLEGGLDAAQAFVRRAWDDRATGQAQAPKHPKSALQEWAAAHRC
KPPVYTMGNRSGPHHAPRFTVTVAIPGRAEASAEGSSKQEAETAAAKALLEKLS
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcaatccccgcgatcggctaaggcgcgcgcgatgaacgacaccgcccttcgcgcc
tggatcgccgacacgctcggtcacgaaccgcgcgacctcgccctgttcgagcgcgcgctg
acccatggcagctacggcccgaaccattatgaacgcctcgaattcctcggcgaccgggtg
ctcggcctggtcgcgggcgcctggctgttcgagctgttccccgacgagcccgagggcaag
ctgtcgcgccgtctcaacgcgatcgtcagccgcgagacctgcgccgacgtcggccgggcg
atcggcgtcgcgacgcacatgaagctcggcaagcaggcgcgcgacgacggcgcggtgcag
agcgacaatgtgctgggcgacgtggtcgaggcgctgatcggcgcgctctacctcgaaggc
gggctcgacgccgcgcaggccttcgtccgccgcgcctgggacgaccgcgccaccggccag
gcgcaggcgcccaagcatcccaagtccgcattgcaggaatgggccgccgcccatcgctgc
aagccgcccgtctacaccatgggcaaccgcagcggcccgcaccacgcgccgcgcttcacc
gtcaccgtcgccatccccggccgggccgaggcgagcgccgagggcagctcgaagcaggaa
gccgaaaccgccgccgccaaggcgcttctggagaaattgtcatga
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