KEGG   Rhizorhabdus wittichii RW1: Swit_0209
Entry
Swit_0209         CDS       T00538                                 
Name
(GenBank) RNAse III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
swi  Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:swi00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    Swit_0209
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:swi03019]
    Swit_0209
   03009 Ribosome biogenesis [BR:swi03009]
    Swit_0209
   03036 Chromosome and associated proteins [BR:swi03036]
    Swit_0209
Enzymes [BR:swi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     Swit_0209
Messenger RNA biogenesis [BR:swi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Swit_0209
Ribosome biogenesis [BR:swi03009]
 Eukaryotic type
  90S particles
   RNase
    Swit_0209
 Prokaryotic type
  rRNA processing factors
   Swit_0209
Chromosome and associated proteins [BR:swi03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     Swit_0209
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM DSRM_2
Other DBs
NCBI-ProteinID: ABQ66580
UniProt: A0A9J9H7V5
LinkDB
Position
complement(209421..210125)
AA seq 234 aa
MTQSPRSAKARAMNDTALRAWIADTLGHEPRDLALFERALTHGSYGPNHYERLEFLGDRV
LGLVAGAWLFELFPDEPEGKLSRRLNAIVSRETCADVGRAIGVATHMKLGKQARDDGAVQ
SDNVLGDVVEALIGALYLEGGLDAAQAFVRRAWDDRATGQAQAPKHPKSALQEWAAAHRC
KPPVYTMGNRSGPHHAPRFTVTVAIPGRAEASAEGSSKQEAETAAAKALLEKLS
NT seq 705 nt   +upstreamnt  +downstreamnt
gtgacgcaatccccgcgatcggctaaggcgcgcgcgatgaacgacaccgcccttcgcgcc
tggatcgccgacacgctcggtcacgaaccgcgcgacctcgccctgttcgagcgcgcgctg
acccatggcagctacggcccgaaccattatgaacgcctcgaattcctcggcgaccgggtg
ctcggcctggtcgcgggcgcctggctgttcgagctgttccccgacgagcccgagggcaag
ctgtcgcgccgtctcaacgcgatcgtcagccgcgagacctgcgccgacgtcggccgggcg
atcggcgtcgcgacgcacatgaagctcggcaagcaggcgcgcgacgacggcgcggtgcag
agcgacaatgtgctgggcgacgtggtcgaggcgctgatcggcgcgctctacctcgaaggc
gggctcgacgccgcgcaggccttcgtccgccgcgcctgggacgaccgcgccaccggccag
gcgcaggcgcccaagcatcccaagtccgcattgcaggaatgggccgccgcccatcgctgc
aagccgcccgtctacaccatgggcaaccgcagcggcccgcaccacgcgccgcgcttcacc
gtcaccgtcgccatccccggccgggccgaggcgagcgccgagggcagctcgaagcaggaa
gccgaaaccgccgccgccaaggcgcttctggagaaattgtcatga

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