Rhizorhabdus wittichii RW1: Swit_0282
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Entry
Swit_0282 CDS
T00538
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi00061
Fatty acid biosynthesis
swi00071
Fatty acid degradation
swi01100
Metabolic pathways
swi01212
Fatty acid metabolism
swi02024
Quorum sensing
swi04146
Peroxisome
Module
swi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Swit_0282
00071 Fatty acid degradation
Swit_0282
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Swit_0282
09145 Cellular community - prokaryotes
02024 Quorum sensing
Swit_0282
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
swi01004
]
Swit_0282
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
swi04147
]
Swit_0282
Enzymes [BR:
swi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Swit_0282
Lipid biosynthesis proteins [BR:
swi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Swit_0282
Exosome [BR:
swi04147
]
Exosomal proteins
Exosomal proteins of breast milk
Swit_0282
Exosomal proteins of breast cancer cells
Swit_0282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABQ66653
UniProt:
A0A9J9H846
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All DBs
Position
298877..300355
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AA seq
492 aa
AA seq
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MTPVVIVGDRVRTRDEAIERGARLAAAMHAAGVEAGDAVALLLRNDFAVLEANLAVRRLD
AYGVPVNWHWHADEIGYVLRDCAPRLLIGHRDLLEAIEDRIPAGLTVVAIGGDPARGWID
YDGWIAGHEPHAGTGTGLGSSMVYTSGTTGRPKAVRRLPASGEESAQRARVLAAIHDSAP
GNVALVTGPLYHLFGQALMTATFGAGGSVVIMERFDPEACLALIERHRVTHSALVPTLFV
RLLRLPDAVKARYDLSSLRHVVHSGAPCAPEVKRAMLGWWGPVLHETYGSTETGVVTKIG
PAEWLERPGSVGRPVLTGEVRIRGEDGGWAPAGTVGDVYLRIHGTPDFTFHGDPAKRAAV
EHDGLVTCGDIGWLDAQGYLFLCDRRVDMLISGGVNIYPAEIEAALLEHRAIGDCAVFGV
PDPEYGEAPVAYVQPASAIDAGAVRAFLRGRLAGYKVPRHIVLTDALPREETGKIMKRKL
REQFLAAERVDG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgacgccggtcgtcatcgtcggcgaccgcgtccgcacccgcgacgaggcgatcgagcgc
ggcgcgcggctcgcggcggcgatgcatgcggcgggggtggaagcgggcgacgcggtcgcg
ctgctgctccgcaacgacttcgcggtgctggaggccaatctcgcggtgcggcggctcgac
gcctatggcgtgccggtcaactggcactggcatgccgacgagatcggctatgtcctgcgc
gattgcgcgccgcggctgctgatcggccaccgcgacctgctggaggcgatcgaggaccgt
atcccggccgggctgaccgtcgtcgcgatcggcggcgatccggcgcggggctggatcgac
tatgacggctggatcgccggccatgagccgcatgccggcaccggcaccggcctgggatcg
tcgatggtctatacctcggggacgaccgggcggcccaaggcggttcggcgcctgcccgcc
tcgggcgaggaatcggcgcagcgcgcgcgggtgctggcggcgatccacgacagcgcgccc
ggcaatgtcgcgctggttaccgggccgctctaccatctgttcggccaggcgctgatgacc
gccaccttcggtgcgggcggatcggtggtgatcatggagcgcttcgatccggaagcctgc
ctggcgctgatcgagcgccaccgcgtcacccacagcgcgctggtgccgactttgttcgtc
cggctgctgcgcctgcccgacgcggtgaaggcccgctacgacctgtcgagcctgcgtcac
gtcgtccattcgggggcgccctgcgcgcccgaggtgaagcgggcgatgctcggctggtgg
gggccggtgctgcacgagacctatggatcgaccgagaccggcgtcgtcaccaagatcggc
cccgccgaatggctcgaacgtccgggcagcgtcggccgcccggtgctgaccggcgaggtg
cgcatccgcggcgaggacggcggctgggcgccggcgggcacggtcggcgacgtctatctg
cgcatccacggcacccccgacttcaccttccacggcgatcccgccaagcgcgcggcggtc
gagcatgacgggctggtcacctgcggcgacatcggctggctcgacgcgcagggctatctc
ttcctgtgcgatcgccgcgtcgacatgctgatctcgggcggggtcaacatctacccggcc
gagatcgaggcggcgctgctcgaacatcgggcgatcggcgactgcgcggtattcggcgtc
cccgaccccgaatatggcgaggcgccggtcgcctatgtccagcccgccagcgcgatcgac
gccggggcggtgcgcgccttcctgcgcggccggctcgcgggctacaaggtgccgcgccac
atcgtcctcaccgatgcgctgccgcgcgaggagaccggcaagatcatgaagcgcaagctg
cgcgagcaattcctggcggcggagcgcgtcgatggctga
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