Rhizorhabdus wittichii RW1: Swit_0399
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Entry
Swit_0399 CDS
T00538
Name
(GenBank) uncharacterised P-loop ATPase protein UPF0042
KO
K06958
RNase adapter protein RapZ
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
swi03019
]
Swit_0399
Messenger RNA biogenesis [BR:
swi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Swit_0399
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_30
T2SSE
Motif
Other DBs
NCBI-ProteinID:
ABQ66767
UniProt:
A5V3A1
LinkDB
All DBs
Position
complement(423867..424808)
Genome browser
AA seq
313 aa
AA seq
DB search
MTKAGMTKAGEPRRILFVTGMSGSGKKTALTALEDMGWETVDNLPVSLLERLLAASPAEG
SIDEGRPLALGIDSRTRDFDSRGVVRRVRSLRDGGRDASILFFDCSNTELSRRYSETRAR
HPLARDRQVEDGISYERELLAPLREAADELIDTTDSSTNELQALLRRRFGDSAGTGTTLT
VMSFAFSRGVPRDADLMFDMRFLRNPHWVPELKPHSGLDPDVGAYIAGDPIYPEARARIE
ELILLLLPRYETEGKSYVTIAIGCTGGKHRSVHFAETLASRLRQEGFSPTVRHRDLTRQK
SNAEESTVPGVGS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaggctggaatgacaaaggccggagagccacgccgcatattgttcgtcaccggc
atgtccggttccggcaagaagaccgcgctgaccgcgctcgaggacatgggctgggagacg
gtcgacaacctgccggtgtcgctgctcgaacggctgctggccgccagcccggccgagggg
agcatcgacgagggccgtcccctcgcgctcggcatcgacagccgcacccgcgatttcgac
agccggggggtggtccgccgggtgcggtcgctgcgcgacggcgggcgcgatgcgtcgatc
ctcttcttcgactgttccaataccgagctgagccgccgctattcggagacgcgcgcgcgc
catccgctggcgcgggaccgccaggtcgaggacgggatcagctatgagcgcgaactgctg
gcgccgctgcgcgaggcggccgacgagctgatcgacaccaccgacagctcgaccaacgag
ctgcaggcgctgctgcgccgccggttcggcgattcggcgggcacggggacgacgctgacc
gtcatgtccttcgccttctcgcgcggggtgccgcgcgacgccgacctgatgttcgacatg
cgcttcctgcgcaatccgcactgggtgcccgaactcaagccccatagcggcctcgatccc
gacgttggcgcctatatcgccggcgacccgatctatcccgaggcgcgcgcgcggatcgag
gaactcattctcctcctgctgccgcgctacgagacggagggcaaaagctatgtgacgatc
gcgataggctgcacggggggcaagcaccgatccgtgcatttcgccgaaaccctcgcaagc
cggttgcgccaggagggattttcgcccacggtccgccaccgcgatttgactcgacagaag
tcgaacgctgaggagagcaccgtgccaggcgtggggtcatga
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