KEGG   Rhizorhabdus wittichii RW1: Swit_0450
Entry
Swit_0450         CDS       T00538                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
swi  Rhizorhabdus wittichii RW1
Pathway
swi03030  DNA replication
swi03410  Base excision repair
swi03420  Nucleotide excision repair
swi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:swi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Swit_0450
   03410 Base excision repair
    Swit_0450
   03420 Nucleotide excision repair
    Swit_0450
   03440 Homologous recombination
    Swit_0450
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:swi03032]
    Swit_0450
   03400 DNA repair and recombination proteins [BR:swi03400]
    Swit_0450
Enzymes [BR:swi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Swit_0450
DNA replication proteins [BR:swi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Swit_0450
DNA repair and recombination proteins [BR:swi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     Swit_0450
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Swit_0450
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 HHH_5 HHH_2 DNA_polI_exo1 DNA_pol_lambd_f HHH Taq-exonuc AP5B1_middle
Other DBs
NCBI-ProteinID: ABQ66818
UniProt: A0A9J9H8E8
LinkDB
Position
complement(477314..480139)
AA seq 941 aa
MFPPAPTPAIHPGMSSKHLYLVDGSGYIFRAYHRLPPLTNRHGIPAGAVYGFTTMLWKLI
NELHQADGPTHLAVILDASSKTFRNEMYDQYKAHRPPPPEDLVPQFPLIRDAVRAFSVPC
IEELGLEADDIIACYAEAALAQDWQVTIVSSDKDLMQLIRPGLDLLDTMNNRRLGREHVL
EKFGVEPEALGDVLALMGDSVDNVPGVPGIGPKTASQLIQQFGTLDAVLASTDQITKPKL
KQSLIDHADNARLSRELVRLKCDAPLPEPLDGLELKGLPPEPLRAFLEDQGFKSLLAKVQ
GDGPATLPTGGPTMLALAPGAEEKPAPVIAQVPFNHKDYETVVDEAALDRWIADGFACGR
IAVDTETDNVDPVRANLVGVSLSTAPGKACYIPLAHIGDGLLSETPRQIAMDAALAKLKP
LLEAAHILKIGQNIKYDMVVLAKYGVDVAPYDDTMLLSYDLDAGLGGHGMDELAQRHLDH
GCIEFKTVCGTGKSQISFDKVTLDVATEYAAEDADVTLRLWQLLKGRLAPEAATRVYELI
DRPLVPVLTGMERAGIKVDREELARLSAEFSGEATRLEAAIHAEAGTPFTVGSPKQLGDI
LFDKMGLKGGRKGKTGVYSTDVTELERLAGDGVAIARLVLDWRQLTKLRSTYTDALQQQI
NPATGRVHTCFSMAVAQTGRLSSTDPNLQNIPIRSDHGRRIRDAFVAEPGKLILSADYSQ
IELRLAAHMADVPALKDAFARGDDIHALTAQEVFGEVNRDTRARAKTINFSILYGISAWG
LAGRLEVSREEAQGMIDRYFSRFPGINHYIAATLGQVRDQGYVSTLFGRKTHLPWIRSAK
QGERQSAERQAINAPIQGTSADIIKRAMVRMNPALAAAGLGDVKMLLQVHDELVFELAPE
QVEPASAVIRAVMAGAAEPIVRLSVPLGVEIGTGPSWGAAH
NT seq 2826 nt   +upstreamnt  +downstreamnt
atgttcccccctgccccgacgcctgctatccaccccggcatgtcatccaagcatctctat
ctggtcgacggctccggctatattttccgggcctatcatcgcctgccgccgctcaccaac
cgccacggaatcccggccggggccgtctacggcttcacgacgatgctgtggaagctgatc
aacgagctgcaccaggccgacggaccgactcacctggcggtgattctcgacgcctcgtcg
aagaccttccgcaacgagatgtacgaccagtacaaggcgcaccggccgccgccgcccgaa
gacctggtgccgcaattcccgctgatccgcgacgcggtgcgcgccttctcggtcccctgc
atcgaggaattggggctcgaggccgacgacatcatcgcctgttatgccgaagccgcgctg
gcgcaggactggcaggtcacgatcgtctcgtccgacaaggacctgatgcagctcatccgg
cccggcctcgacctgctcgacacgatgaacaaccgccgcctcggccgcgagcatgtgctg
gagaaattcggcgtcgagccggaggcgctgggcgacgtgctcgcgctgatgggcgacagc
gtcgacaatgtccccggcgtccccggcatcggacccaagaccgcgagccagctcatccag
cagttcggcaccctcgacgcggtgctggccagcaccgaccagatcaccaagcccaagctc
aagcagtcgctgatcgaccatgcggacaacgcccggctgtcgcgcgagctggtccgcctg
aaatgcgatgcgccgctgcccgagccgctcgacgggctggaattgaagggcctgccgccc
gagccgctgcgcgccttcctggaggaccagggcttcaagtcgctgctcgccaaggtgcag
ggcgacggccccgccaccctgccgaccggcggcccgaccatgctggcgctcgcgcccggc
gccgaagagaagccggcgcccgtgatcgcgcaggtgccgttcaaccataaggattacgag
accgtcgtcgacgaggcggcgctcgaccgctggatcgccgacggcttcgcctgcggccgg
atcgcggtcgacaccgagaccgacaatgtcgatccggtccgcgccaacctggtcggggtc
agcctgtccaccgcgccgggcaaggcctgctacatcccgctcgcccatatcggcgacggg
ctgctgtcggagacgcccaggcagatcgcgatggacgcggcgctggcgaagctcaagccc
ctgctcgaagccgcgcacatcctcaagatcggccagaacatcaaatatgacatggtcgtg
ctggccaaatacggcgtcgacgtcgcgccctatgacgacacgatgctgctgtcctacgat
ctcgacgccgggctcggcggccacggcatggacgaattggcgcagcgccacctcgaccat
ggctgcatcgagttcaagacggtgtgcggcaccggcaagagccagatcagcttcgacaag
gtgacgctcgacgtcgccaccgaatatgccgccgaggacgccgacgtcacgctgcgcctg
tggcagctgctgaaggggcggctcgcgcccgaggcggcgacccgcgtctatgagctgatc
gaccggccgctggtgccggtgctgacgggcatggagcgcgccggcatcaaggtcgaccgc
gaggaactggcccggctgtcggccgagttctcgggcgaggcgacccggctggaggccgcg
atccacgccgaggcggggacgccgttcaccgtcggcagccccaagcagctcggcgacata
ttgttcgacaagatgggcctgaagggcggccgcaagggcaagaccggggtctattcgacc
gacgtcaccgaactggagcggctcgccggcgacggcgtggcgatcgcgcggctggtgctc
gactggcgtcagctcaccaagctgcgctcgacctataccgacgcgctccagcagcagatc
aatccggcgacgggccgggtccacacctgcttctcgatggcggtcgcgcagaccggccgg
ctgtcctcgaccgatcccaacctccagaacatcccgatccgcagcgaccatggccgccgt
atccgcgacgccttcgtggccgagccgggcaagctcatcctgtcggccgactattcgcag
atcgagctgcggctggcggcgcacatggccgacgtgccggcgctgaaggacgccttcgcg
cgcggcgacgacatccacgcgctgaccgcgcaggaggtgttcggcgaggtcaaccgcgac
acccgcgcccgcgccaagacgatcaacttctcgatcctctacggcatctccgcctggggc
ctcgccgggcgcctggaggtgtcgcgcgaggaagcgcaggggatgatcgaccgctatttc
tcccgcttccccggcatcaaccactatatcgccgcgaccctcggccaggtccgcgaccag
ggctatgtgtcgacgctgttcggccgcaagacccatctgccgtggatcaggagcgccaag
cagggcgagcgccagtccgccgagcgccaggcgatcaacgccccgatccagggcacctcc
gccgacatcatcaagcgcgcgatggtgcggatgaaccccgcgctcgccgccgccgggctg
ggcgacgtgaagatgctgctccaggtccatgacgaactggtgttcgagctggcgcccgag
caggtcgagccggcatcggcggtgatccgcgcggtgatggcgggcgcggccgagccgatc
gtccggctgtcggtgccgctgggcgtcgagatcggcacggggccgagctggggcgccgcg
cattga

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