Rhizorhabdus wittichii RW1: Swit_0478
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Entry
Swit_0478 CDS
T00538
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swi02000
]
Swit_0478
Transporters [BR:
swi02000
]
Other transporters
Pores ion channels [TC:
1
]
Swit_0478
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Opacity
KdgM
Motif
Other DBs
NCBI-ProteinID:
ABQ66846
UniProt:
A0A9J9LDD0
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Position
511850..514012
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AA seq
720 aa
AA seq
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MKKIISGSSIKVLGVILCMAPAHAVFAAEAGADSEVSSVDSGEIVVTARRRAESLQDVPV
SVTAFDQAQLETAGIKSLRDMSRLMPGVQFTERGSLSTQLTIRGVGGDSRNIGIEAGVGM
YLDGVYIPRTSGYNADLAEIAQVEVLRGPQGTLFGKNTIGGVINITTKEPGDTVEGSVYA
SYGNYNAFRTQASISGPLSDTLSAKLTVATYDRDGYIHNIFNDQDVNDENRRGARAQIVF
KPSDALKVKLNADFTRDRRTVLQTQMDSPVGAAAPYYTGNRFEANSDQPNGDKRNMWGTD
LTAEYSLPNDMVLASISAYRKIDVTVSSDIDQLPINLFNSNPLTDFVQMASQEFRITSPS
DGPFRYVGGLYYYHQKGTALRKIYIGGSLANGALNRAKAITNSYAAYINADYDLLPQLTL
NGGLRYTYEKKTGDYLQVRGPVLSYDFDDLRRTDKNVSWTGSLTYKPTRELTIYGTVSKG
FKSGGFNLDTIGAANLISRDLIFGPESVINYEAGIKGQLFGRLLRYSLAAFRMDYSDKQV
AQIVPTGASTVSSVQVTNAGKARIKGFEVEATLRPFEGLSLSGNASYLDAKYTRFDYSTI
GSTVAVSYAGNRIEFTPDWMIGGQAEYRFPAGPGEVFLVGSATYTGDMYLQPEKLPKYRE
SGYTLIDARIGYEVGDLMIALWGKNLTKQDYRTYARVFGGLDQAVWGEPRTYGVEMRYRF
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagataatttctgggtcatccataaaagtgcttggcgttatcctctgcatggcg
cccgcccatgcggtattcgcggccgaagccggcgccgatagcgaggtttcttctgtcgat
agcggcgagatcgtcgtcaccgcccggcgccgcgccgaaagcctgcaggacgttcctgtc
tctgtgacagccttcgaccaggcccaactcgaaaccgccggcatcaagagcctgcgcgac
atgtcgcggctgatgcccggcgtccagttcaccgagcgcggcagcctgtcgacccagctc
accatccgcggcgtcggcggggattcgcgcaacatcggcatcgaggccggcgtcggcatg
tatctcgacggcgtctatatcccccgcacctcgggctacaatgccgacctggccgagatc
gcccaggtcgaggtgctgcgcggaccgcaggggacgctgttcggcaagaatacgatcggc
ggcgtcatcaacatcaccaccaaggagcccggcgacaccgtcgagggcagcgtctacgcc
agctatggcaactacaacgccttccggacgcaggcgagcatctccggcccgctgtcggac
acgctgtcggccaagctgaccgtcgcgacctatgaccgcgacggctatatccacaacatc
ttcaacgatcaggacgtcaatgacgagaaccgccgcggcgcccgcgcgcagatcgtcttc
aagccgtccgacgcgctgaaggtcaagctgaacgccgacttcacccgcgaccggcgcacc
gtgctccagacccagatggattcgccggtcggtgcggcggcgccctattataccggcaac
cggttcgaggcgaacagcgaccagcccaatggcgacaagcgcaacatgtggggcaccgac
ctgacggcggaatacagcctgccgaacgacatggtgctggcatcgatctcggcctatcgg
aagatcgacgtcacggtgtcgagcgacatcgaccagcttccgatcaacctgttcaactcc
aatcccttgaccgacttcgtgcagatggcgagtcaggaattccggatcacctcgcccagc
gacggcccgttccgctacgtcggcggcctctattattaccaccagaagggcaccgcgctg
cggaagatctatatcggcgggtcgctggccaacggcgcgctcaaccgtgccaaggcgatc
accaacagctacgccgcctatatcaacgccgattacgacctgctgccgcagctcaccctc
aacggcggcctgcgctacacctatgagaagaagaccggcgactatctgcaggttcgcggc
ccggtgctgagctatgatttcgacgatctgcgccgcaccgacaagaacgtctcctggacg
ggcagcctgacctacaagccgacccgcgaactgacgatctacgggaccgtctcgaagggc
ttcaagtcgggcggcttcaacctcgacacgatcggcgcggccaacctgatctcgcgcgac
ctgatctttggcccggaatcggtgatcaactatgaggccgggatcaagggccagctgttc
ggccggctgctgcgctacagcctggcggcgttccgcatggactattcggacaagcaggtc
gcccagatcgtgccgaccggggcgagcaccgtctcgtcggtccaggtcaccaacgcaggc
aaggcgcggatcaagggcttcgaggtcgaggcgacgctgcggccgttcgaagggctgagc
ctgtcgggcaacgcctcctatctcgacgccaaatatacccgcttcgactattcgacgatc
ggctcgacggtggcggtctcctatgccggcaaccggatcgagttcacccccgactggatg
atcggcgggcaggccgaatatcgtttcccggccggaccgggcgaggtcttcctggtcggc
agcgccacctataccggcgacatgtacctccagcccgagaagctgccgaaatatcgtgag
tccggctatacgctgatcgacgcgcggatcggctatgaggtcggcgacctgatgatcgcg
ctgtggggcaagaacctcaccaagcaggactatcgcacctatgcccgcgtgttcggcggc
ctcgaccaggcggtctggggcgagccgcgcacctatggcgtcgagatgcgctaccgcttc
tga
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