Rhizorhabdus wittichii RW1: Swit_0490
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Entry
Swit_0490 CDS
T00538
Name
(GenBank) Uncharacterized protein
KO
K21470
L,D-transpeptidase YcbB
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
swi01002
]
Swit_0490
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
swi01011
]
Swit_0490
Peptidases and inhibitors [BR:
swi01002
]
Cysteine peptidases
Family C82
Swit_0490
Peptidoglycan biosynthesis and degradation proteins [BR:
swi01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Swit_0490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
Motif
Other DBs
NCBI-ProteinID:
ABQ66858
UniProt:
A0A9J9LCQ8
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All DBs
Position
524919..526637
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AA seq
572 aa
AA seq
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MSGVAVHLPAIERAACLPVRSGWTVARQSAAPAQGRLPDEDKIDRHVDGHGADAQRLRQH
AEKRGGRDRRAAAAAARRRSRQRRRRSRRRRDRRRLLFGRRHLSPEPAAGPAAASPAADP
PRGTGLIAHFGGMRRVRIPQLALLLLAGLACTTVSAEAAKPKIAARAKPVAGQRAIALAI
RDQGRGQIASFYATRGFWPLWASSGRIGPEADTLIAMLKTADLDGLDPSSYRIDRLRALV
AKGRSADPQAIAEAELALSAAFADYVADVRKPRGVRIKYLDPELKPRPATARTALRGAAL
QPSLGSYIATMGWMSPHYVRLRALLAQARERKSPRETVQRLRLNLDRARLLPGPWTRHVV
VDAASARLWYYEGGKQRAMMRVVVGAPETETPMLAGMVRYAVLNPYWNVPDYLIQRRLAP
KIVAGATPASLRMEVLSDWSASPRRLAGDEVDWPAVAAGRKLVRMRQLPGRDNAMGRVKF
IFPNDLGIYLHDTPDKGLLSKADRHLSNGCIRLQDAPGLYRLMFGRPLPAASKQPERDVA
LPAPIPVYLTYITATPTERGIGFLKDVYGRDE
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcgttgccgttcatcttccagccatcgaacgggcagcctgcttgcccgtgcgg
tccggctggaccgtcgcccgccagtccgcggcgccagcccaagggaggttgcccgatgaa
gataagattgatcgccatgtcgatggccacggcgctgatgctcagcgcctgcgccagcac
gcagagaagcgaggaggtcgcgaccgccgcgccgccgccgccgccgcccggcgccgttcc
cggcagcgtcgccgccgatcgcgacggcgacgggatcgtcgacggctattattcggccga
cggcatctatcacccgaacctgccgccggccccgccgccgcctcccccgccgccgacccg
ccgcggggaacggggctgatcgcccacttcgggggaatgcggcgcgtccgcattccccag
cttgccctgctcctgctggccgggctcgcctgtacgaccgtctccgccgaagccgccaaa
cccaagatcgccgccagggccaagcccgtcgccgggcaacgcgcgatcgcgctcgccatc
cgtgaccagggccgtggccagatcgcgagcttctacgccacgcgcggcttctggccgctc
tgggcgtcgagcggccggatcggccccgaggccgacacgctgatcgccatgctgaagacc
gccgatctcgacggcctcgatccgtcctcctatcgcatcgaccggctccgcgccctcgtc
gccaagggacgctccgccgatccgcaggcgattgcggaggctgaactggcgctgtcggcg
gccttcgccgactatgtcgccgacgtccgcaagccgcgcggcgtccgcatcaaatatctc
gaccccgagctcaagccgcgccccgccaccgcgcggaccgcgctgaggggcgccgcgctg
cagccgtcgctcggcagctatatcgcgacgatgggatggatgagcccgcattatgtccgg
ctgcgcgccctgctcgcccaggcccgggagcgcaagagcccgcgcgagaccgtccagcgc
ctgcgcctcaacctcgatcgcgcccggctgctgccaggtccatggacccgccatgtcgtc
gtcgacgcggcgtcggcgcggctctggtattatgagggcggcaagcagcgcgcgatgatg
cgcgtcgtcgtcggcgcgcccgagaccgagacgccgatgctggccggcatggtccgctac
gcggtcctcaacccctattggaatgtccccgactatctgatccagcgcaggctcgccccg
aagatcgtcgccggcgcgacgccggcctcgctgcggatggaggtgctgtccgactggagc
gcctccccgcgccgcctcgccggcgacgaggtcgactggccggcggtcgccgcgggccgc
aagctggtgcggatgcgccagcttcccggccgcgacaatgcgatggggcgggtcaagttc
atcttccccaacgatctcggcatctacctccacgacacgcccgacaaggggctgctgtcg
aaagccgaccggcatctcagcaacggctgcatccgcctccaggatgcgccgggcctgtac
cgcctgatgttcggacgccccctccccgccgcgtcgaagcagcccgagcgcgacgtggcg
ctgccggcgccgatccccgtctatctgacctatatcaccgcgacgccgaccgagcgcggc
atcggcttcctgaaggacgtctacggccgcgacgaatga
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