Rhizorhabdus wittichii RW1: Swit_0540
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Entry
Swit_0540 CDS
T00538
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swi02000
]
Swit_0540
Transporters [BR:
swi02000
]
Other transporters
Pores ion channels [TC:
1
]
Swit_0540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ABQ66908
UniProt:
A0A9J9H8K2
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All DBs
Position
591692..593791
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AA seq
699 aa
AA seq
DB search
MSFKGRLSFSISMFALMASPAFADERDNDYHRPESADIIVTAPLQRDRMDVLAGTSVLTG
AQLTTALRPTIGETIEHTPGVSATSFGPNASRPILRGLQGERVRVLTDGIGSVDVSNTSV
DHAVAINPLLAERIEVLRGPEALLYGSAAIGGVVNVIDKRIPRAIPDEPVHVDAILTYGS
AANERSGGAALDAPIGGGFVAHLDGSYQKTGNLRIGGYALSPAARAQALASAQLPADPDE
EIDFAANAAVKGKLPNSQSETWVAGGGLSYIDGDSHYGIAYSHYDSRYGVPIRFATEPGQ
EQEAPRIDLVQNRFDARAEIAAGGSVIQTIRARLAYAKYRHFELEEDGSVGTAFYNNGFE
GRVELVQADHGAWHGATGAQFFIRDFNVVGDEAFLPRNQTQQIGLFTLQQLDYGVVKLEG
GLRYEKSWLSANPFEDQPQFPKGSRNFDTLSGSIGASYRVTDDWRLGVNLSRTERAPAAE
ELFANGPHAGTEAFEIGSPDFKTERSWGLEGVLHGKGPGFTIHASIYHNWFDNFIYDSPD
GTLEDGLPVFRYAQAKARFYGAELEATADLAQLGGFAIKADALGDFVHAKITGFGPAPRI
PPLRLLGGLSAESARVDGRVEVEWTDKAQRLASFETPTAGYTLVNASLTLRPFADRPETS
IVLAAHNIFDVNARRHASYLKDFAPLAGRDFRVTARVGF
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcaagggtcggttgtccttctccatttccatgttcgcgctgatggcctcgccg
gccttcgccgacgaacgggacaacgactatcaccgccccgaatccgccgacatcatcgtc
accgcgccgctccagcgcgaccggatggacgtgctggcgggcacctcggtgctgaccggc
gcgcagctcaccacggcgctgcgcccgacgatcggcgagacgatcgagcatacgccgggc
gtctcggccacctccttcggccccaacgcgtcgcgcccgatcctgcgcggcctgcagggc
gagcgggtccgggtgctgaccgacgggatcggctcggtcgacgtgtcgaacaccagcgtc
gaccatgccgtcgcgatcaacccgctgctcgccgagcggatcgaggtgctgcgcgggccg
gaggcgctgctctacggatcggccgcgatcggcggcgtcgtcaacgtgatcgacaagcgc
atcccgcgcgccatccccgacgagcccgtccatgtcgacgcgatcctgacctatggcagc
gccgccaacgagcgctcgggcggcgccgcgctcgacgcgccgatcggcggcggcttcgtc
gcgcacctcgacggcagctaccagaagaccggcaacctgcggatcgggggctatgcgctg
agccccgccgcccgcgcgcaggcgctcgcctcggcgcagcttcctgccgacccggacgag
gagatcgatttcgccgccaacgccgcggtcaagggcaagctgcccaacagccagtcggag
acctgggtcgccggcggcggcctgtcctatatcgacggggacagccattacggcatcgcc
tacagccattatgacagccgctacggcgtgccgatccgcttcgccaccgagccgggccag
gagcaggaggcgccgcgcatcgacctcgtccagaaccgcttcgacgcgcgcgcggagatc
gccgccggcggatcggtgatccagaccatccgcgcccggctcgcctacgccaaatatcgc
catttcgagctggaggaggacggctcggtcggcaccgccttctacaataacggcttcgaa
ggccgggtcgagctggtccaggccgatcatggcgcgtggcatggcgcgaccggcgcgcag
ttcttcatccgcgacttcaacgtcgtcggcgacgaagccttcctgccgcgcaaccagacc
cagcagatcggcctcttcaccctccagcagctcgactatggcgtggtgaagctcgaaggc
gggctgcgctacgagaagagctggctgtcggccaacccgttcgaggaccagccgcaattc
cccaagggcagccgcaacttcgacacgctgtcgggatcgatcggcgcctcctaccgggtg
accgacgactggcggctgggcgtcaacctgtcgcgcaccgaacgcgcgccggccgccgag
gagctgttcgccaacggcccgcacgcgggcaccgaggcgttcgagatcggcagcccggat
ttcaagaccgaacggagctggggcctcgaaggcgtgctgcacggcaagggcccgggcttc
accatccacgcgtcgatctatcacaactggttcgacaacttcatctacgacagcccggac
ggtacgctggaagacggcctgcccgtgttccgctacgcccaggccaaggcccgcttctac
ggcgcggagctcgaggcgaccgccgatctcgcccagctcggcggcttcgcgatcaaggcc
gacgcgctaggcgatttcgtccatgcgaagatcaccggcttcggtcccgccccgcgtatc
cccccgctgcgcctgctgggcggcctgagcgccgaaagcgccagggtcgacggccgggtc
gaggtcgaatggaccgacaaggcgcagcgactcgccagcttcgagacgccgaccgccggc
tacacgctggtcaacgcctcgctgaccctgcgcccgttcgccgaccggccggagaccagc
atcgtgctggccgcgcacaatatcttcgacgtcaacgcccgccgccatgcgagctacctc
aaggacttcgccccgctcgccggccgcgacttccgcgtcaccgcgcgagtgggcttctag
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