Rhizorhabdus wittichii RW1: Swit_0637
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Entry
Swit_0637 CDS
T00538
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Swit_0637
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
swi01007
]
Swit_0637
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
swi03016
]
Swit_0637
Enzymes [BR:
swi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
Swit_0637
Amino acid related enzymes [BR:
swi01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Swit_0637
Transfer RNA biogenesis [BR:
swi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Swit_0637
Prokaryotic type
Swit_0637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
ABQ67005
UniProt:
A5V3Y9
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All DBs
Position
689952..691229
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AA seq
425 aa
AA seq
DB search
MHDIRLIREDPAAFDAAIARRGAESASSRLLALDERRRAIATELQAAQTRRNEASKAIGQ
AKAQKDEATASALMAEVAALKERMPALEAEGAEVEAALDAALAAIPNLPAADVPDGADEQ
DNAEQHRWGTPPAFAFEAREHADFAGPLGLDFEAAAAISGARFAVLKGGIARLQRALGAF
MLDRQTAAGFTEVIPPLLVRDEAVFGTGQLPKFAEDLFRTTDGRWLIPTAEVSLTNLVRE
QIVAEAELPMKMTALTPCFRSEAGAAGRDTRGLIRQHQFEKVELVAITTPEQSDAVHEAM
TKAAEAILEALGLPYRRVLLCTGDMGFTARKTFDLEVWLPGQGCYREISSVSNCGDFQAR
RMNARYRPAGESKGTRFVHTLNGSGLAVGRTLVAVLENYQQADGSVTIPEALVPYMGGIA
ELRPA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacatccgcctgatccgcgaagatcccgccgccttcgatgccgccatcgcccgc
cggggagccgagtcggcatcgtcgcggctgctcgcgctcgacgagcgccgccgcgcgatc
gcgaccgaattgcaggccgcgcagacccgccgcaacgaggcgtcgaaggcgatcggccag
gccaaggcgcagaaggacgaagcgaccgcatccgcgctgatggccgaggtcgccgcgctc
aaggagcgcatgcccgcgctggaagccgagggcgccgaggtcgaggccgcgctcgacgcc
gcgctcgccgcgatccccaacctgcccgccgccgacgttcccgatggcgccgacgagcag
gacaatgccgagcagcaccgctggggcaccccgcccgccttcgccttcgaggcgcgcgag
catgccgatttcgccggtccgctgggcctcgacttcgaggcggccgccgcgatctccggc
gcgcgcttcgcggtgctcaagggcggcatcgcccggctgcagcgcgcgctcggcgcgttc
atgctcgaccggcagaccgccgccggcttcaccgaggtgatcccgccgctgctggtccgc
gacgaagcggtgttcggcaccggccagctcccgaagttcgccgaggacctgtttcgcacc
accgacggccgctggctgatcccgaccgccgaggtcagcctgaccaacctggtccgcgag
cagatagtggccgaggccgaactgccgatgaagatgaccgcgctcaccccctgcttccgt
tccgaggcaggtgctgcgggccgcgacacgcgcgggctgatccgccagcaccagttcgag
aaggtcgagctggtcgcgatcaccacgcccgaacagtccgacgcggtccacgaggcgatg
accaaggcggccgaggcgatcctggaggcgctcggcctgccctatcgccgcgtcctgctc
tgcaccggcgacatgggcttcaccgcgcgcaagaccttcgacctggaggtctggctgccg
ggccagggctgctatcgcgagatcagcagcgtctccaactgcggcgacttccaggcgcgc
cggatgaacgcgcgctatcgcccggccggcgagagcaagggcacccgcttcgtccacacc
ctcaacggatcgggcctcgcggtcggccgcaccctcgtcgcggtgctggagaattaccag
caggccgacggatcggtgacgatccccgaggcgctcgtcccctatatgggcgggatcgcc
gagctgcgcccggcatga
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